Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SIP5 |
| Gene Symbol Synonym | OsARID3, ARID3, OsSIP5 |
| CGSNL Gene Name | SKIP INTERACTING PROTEIN 5 |
| Gene Name Synonym | AT-rich Interaction Domain-containing protein 3, SKIP interacting protein 5, SKIPa-interacting protein 5, SKIPa-interacting protein 5, ARID transcription factor 3, AT-Rich Interaction Domain-containing transcription factor 3, ARID-containing transcription factor 3 |
| Protein Name | SKIP INTERACTING PROTEIN 5 |
| Allele | Osarid3 |
| Chromosome No. | 6 |
| Explanation | EU368695. ARID protein, Hsp20 subfamily. GO:1902182: shoot apical meristem development. |
| Trait Class |
Vegetative organ - Shoot apical meristem(SAM)
Tolerance and resistance - Insect resistance Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK064549
|
| MSU ID |
LOC_Os06g41730.1
LOC_Os06g41730.2 |
| RAP ID |
Os06g0622300 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Dai Y.S., Liu D., Guo W., Liu Z.X., Zhang X., Shi L.L., Zhou D.M., Wang L.N., Kang K., Wang F.Z., Zhao S.S., Tan Y.F., Hu T., Chen W., Li P., Zhou Q.M., Yuan L.Y., Zhang Z., Chen Y.Q., Zhang W.Q., Li J., Yu L.J., Xiao S.
Plant Biotechnol. J. 2023 21(6) 1286-1300 Poaceae-specific β-1,3;1,4-d-glucans link jasmonate signalling to OsLecRK1-mediated defence response during rice-brown planthopper interactions.
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Liu J., Shen J., Xu Y., Li X., Xiao J., Xiong L.
J. Exp. Bot. 2016 67(19) 5785-5798 Ghd2, a CONSTANS-like gene, confers drought sensitivity through regulation of senescence in rice.
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Xu Y., Zong W., Hou X., Yao J., Liu H., Li X., Zhao Y., Xiong L.
Plant J. 2015 83(5) 806-17 OsARID3, an AT-rich Interaction Domain-containing protein, is required for shoot meristem development in rice.
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Hou X,Xie K,Yao J,Qi Z,Xiong L
Proc. Natl. Acad. Sci. U.S.A. 2009 106 6410-5 A homolog of human ski-interacting protein in rice positively regulates cell viability and stress tolerance.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
DNA binding( GO:0003677 )
nucleus( GO:0005634 ) cytokinin biosynthetic process( GO:0009691 ) regulation of transcription, DNA-dependent( GO:0006355 ) meristem maintenance( GO:0010073 ) auxin homeostasis( GO:0010252 ) regulation of auxin biosynthetic process( GO:0010600 ) response to water deprivation( GO:0009414 ) defense response to insect( GO:0002213 ) |
| Trait Ontology |
shoot meristem development( TO:0002638 )
shoot apical meristem development( TO:0006020 ) auxin content( TO:0002672 ) cytokinin content( TO:0002660 ) drought tolerance( TO:0000276 ) brown planthopper resistance( TO:0000424 ) |
| Plant Ontology |
shoot apical meristem( PO:0020148 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Aug 16, 2023 | |
