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Basic Information
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CGSNL Gene Symbol
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YS53
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Gene Symbol Synonym
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GSA, GSAT, HEML, OsGSA, OsGSAT, OsHEML, OsGSAM, GSAM, OsYS53
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CGSNL Gene Name
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_
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Gene Name Synonym
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"Glutamate-1-semialdehyde 2,1-aminomutase", Glutamate-1-semialdehyde aminotransferase
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Protein Name
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GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE
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Allele
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ys53
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Chromosome No.
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8
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Explanation
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Q6YZE2. PO:0030123: panicle inflorescence. GO:1901463: regulation of tetrapyrrole biosynthetic process.
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Trait Class
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Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Coloration - Chlorophyll
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK064826
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MSU ID
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LOC_Os08g41990.1
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RAP ID
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Os08g0532200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Liu X., Deng X.J., Li C.Y., Xiao Y.K., Zhao K., Guo J., Yang X.R., Zhang H.S., Chen C.P., Luo Y.T., Tang Y.L., Yang B., Sun C.H., Wang P.R.
Int J Mol Sci 2022 23(10)
Mutation of Protoporphyrinogen IX Oxidase Gene Causes Spotted and rolled leaf and Its Overexpression Generates Herbicide Resistance in Rice.
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Wang Q., Zhu B., Chen C., Yuan Z., Guo J., Yang X., Wang S., Lv Y., Liu Q., Yang B., Sun C., Wang P., Deng X.
Rice (N Y) 2021 14(1) 50
A Single Nucleotide Substitution of GSAM Gene Causes Massive Accumulation of Glutamate 1-Semialdehyde and Yellow Leaf Phenotype in Rice.
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Zhu X., Mou C., Zhang F., Huang Y., Yang C., Ji J., Liu X., Cao P., Nguyen T., Lan J., Zhou C., Liu S., Jiang L., Wan J.
Rice (N Y) 2020 13(1) 45
WSL9 Encodes an HNH endonuclease domain-containing protein that Is Essential for Early Chloroplast Development in Rice.
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Nounjan N., Chansongkrow P., Charoensawan V., Siangliw J.L., Toojinda T., Chadchawan S., Theerakulpisut P.
Front Plant Sci 2018 9 1135
High Performance of Photosynthesis and Osmotic Adjustment Are Associated With salt tolerance Ability in Rice Carrying drought tolerance QTL: Physiological and Co-expression Network Analysis.
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Liu Z., Wang Z., Gu H., You J., Hu M., Zhang Y., Zhu Z., Wang Y., Liu S., Chen L., Liu X., Tian Y., Zhou S., Jiang L., Liu L., Wan J.
Front Plant Sci 2018 9 782
Identification and Phenotypic Characterization of <i>ZEBRA LEAF16</i> Encoding a beta-hydroxyacyl-ACP dehydratase in Rice.
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Kwon C.T., Kim S.H., Song G., Kim D., Paek N.C.
Rice (N Y) 2017 10(1) 1
Two NADPH: Protochlorophyllide Oxidoreductase (POR) Isoforms Play Distinct Roles in Environmental Adaptation in Rice.
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Inagaki N., Kinoshita K., Kagawa T., Tanaka A., Ueno O., Shimada H., Takano M.
PLoS ONE 2015 10(8) e0135408
Phytochrome B Mediates the Regulation of Chlorophyll Biosynthesis through Transcriptional Regulation of ChlH and GUN4 in Rice Seedlings.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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protoporphyrinogen IX biosynthetic process( GO:0006782 )
transaminase activity( GO:0008483 )
chloroplast( GO:0009507 )
chlorophyll biosynthetic process( GO:0015995 )
pyridoxal phosphate binding( GO:0030170 )
response to salt stress( GO:0009651 )
chloroplast organization( GO:0009658 )
regulation of photosynthesis( GO:0010109 )
tetrapyrrole biosynthetic process( GO:0033014 )
glutamate-1-semialdehyde 2,1-aminomutase activity( GO:0042286 )
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Trait Ontology
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salt tolerance( TO:0006001 )
leaf color( TO:0000326 )
chlorophyll content( TO:0000495 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
carotenoid content( TO:0000496 )
net photosynthetic rate( TO:0001027 )
photosynthetic ability( TO:0000316 )
internode length( TO:0000145 )
plant height( TO:0000207 )
panicle number( TO:0000152 )
spikelet number( TO:0000456 )
seed set percent( TO:0000455 )
chloroplast development trait( TO:0002715 )
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Plant Ontology
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root( PO:0009005 )
stem( PO:0009047 )
leaf sheath( PO:0020104 )
leaf( PO:0025034 )
inflorescence( PO:0009049 )
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Related Strains
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Phenotype images
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Last updated
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Oct 21, 2022
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Update info.