Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HDY1
Gene Symbol Synonym OsFdC2, FdC2, OsHDY1, PetF-2
CGSNL Gene Name HEADING DATE DELAY AND YELLOWISH LEAF 1
Gene Name Synonym ferredoxin-like protein with C-terminal extension 2, Ferredoxin C2
Protein Name FERREDOXIN C2
Allele hdy1
Chromosome No. 3
Explanation OsFdC2 is the ortholog of AtFdC2.
Trait Class Biochemical character
Vegetative organ - Leaf
Reproductive organ - Heading date
Coloration - Chlorophyll
Expression
Sequence/Locus
cDNA Accession No. AK059896
MSU ID LOC_Os03g48040.1
LOC_Os03g48040.2
RAP ID Os03g0685000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Wang B., Zhong Z., Wang X., Han X., Yu D., Wang C., Song W., Zheng X., Chen C., Zhang Y.
Int J Mol Sci 2020  21(7) 
Knockout of the <i>OsNAC006</i> Transcription Factor Causes Drought and Heat Sensitivity in Rice.
Wu Q., Zhang C., Chen Y., Zhou K., Zhan Y., Jiang D.
Int J Mol Sci 2020  21(11) 
OsCpn60beta1 is Essential for Chloroplast Development in Rice (<i>Oryza sativa</i> L.).
Li C., Hu Y., Huang R., Ma X., Wang Y., Liao T., Zhong P., Xiao F., Sun C., Xu Z., Deng X., Wang P.
Plant Sci. 2015  238  127-34
Mutation of FdC2 gene encoding a ferredoxin-like protein with C-terminal extension causes yellow-green leaf phenotype in rice.
Zhao J., Qiu Z., Ruan B., Kang S., He L., Zhang S., Dong G., Hu J., Zeng D., Zhang G., Gao Z., Ren D., Hu X., Chen G., Guo L., Qian Q., Zhu L.
PLoS ONE 2015  10(11)  e0143361
Functional Inactivation of Putative Photosynthetic Electron Acceptor Ferredoxin C2 (FdC2) Induces Delayed heading date and Decreased photosynthetic rate in Rice.
TextPresso Search Search textpresso for HDY1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology photoperiodism, flowering( GO:0048573 )
2 iron, 2 sulfur cluster binding( GO:0051537 )
pentose-phosphate shunt( GO:0006098 )
electron carrier activity( GO:0009055 )
chloroplast( GO:0009507 )
abscisic acid biosynthetic process( GO:0009688 )
stomatal complex morphogenesis( GO:0010103 )
isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway( GO:0019288 )
electron transport chain( GO:0022900 )
metal ion binding( GO:0046872 )
Trait Ontology leaf color( TO:0000326 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
photosynthetic rate( TO:0001015 )
days to heading( TO:0000137 )
Plant Ontology leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Oct 7, 2020


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