Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol LHP1
Gene Symbol Synonym OsLHP1, OsPcG14, PcG14
CGSNL Gene Name LIKE HETEROCHROMATIN PROTEIN 1
Gene Name Synonym LHP1 homolog, Polycomb group protein 14
Protein Name LIKE HETEROCHROMATIN PROTEIN 1
Allele Oslhp1, Oslhp1-1, Oslhp1-2, Oslhp1-3, Oslhp1-4, Oslhp1-5, Oslhp1-6, Oslhp1-7, Oslhp1-8, Oslhp1-9, Oslhp1-10
Chromosome No. 10
Explanation Q339W7. chromatin regulator. a putative PRC1 (Polycomb Repressive Complex 1) subunit. GO:0061085: regulation of histone H3-K27 methylation.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
Expression
Sequence/Locus
cDNA Accession No. AK243085
MSU ID LOC_Os10g17770.1
RAP ID Os10g0324900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Shi Z., Cao J., Li C., Liu J., Yang X., Cheng X.
Plants (Basel) 2025  14(17) 
Genome-Wide Analysis of the Rice PcG Gene Family and Its Involvement in Salt Response and Development.
Zhang P., Zhu C., Geng Y., Wang Y., Yang Y., Liu Q., Guo W., Chachar S., Riaz A., Yan S., Yang L., Yi K., Wu C., Gu X.
Plant Cell 2021   
Rice and Arabidopsis homologs of yeast CHROMOSOME TRANSMISSION FIDELITY PROTEIN 4 commonly interact with Polycomb complexes but exert divergent regulatory functions.
Cui Y., Cheng J., Ruan S., Qi P., Liu W., Bian H., Ye L., Zhang Y., Hu J., Dong G., Guo L., Zhang Y., Qian Q., Hu X.
J Integr Plant Biol 2020  62(12)  1839-1852
The heterochronic gene Oryza sativa LIKE HETEROCHROMATIN PROTEIN 1 modulates miR156b/c/i/e levels.
Guan H. , Zheng Z. , Grey P.H. , Li Y. , Oppenheimer D.G.
Mol. Genet. Genomics 2011  285(5)  357-73
Conservation and divergence of plant LHP1 protein sequences and expression patterns in angiosperms and gymnosperms.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to salt stress( GO:0009651 )
regulation of hormone metabolic process( GO:0032350 )
vegetative phase change( GO:0010050 )
nuclear-transcribed mRNA catabolic process( GO:0000956 )
photoperiodism, flowering( GO:0048573 )
regulation of mitotic cell cycle( GO:0007346 )
RNA interference( GO:0016246 )
histone H3-K27 methylation( GO:0070734 )
leaf senescence( GO:0010150 )
regulation of vegetative phase change( GO:0010321 )
hormone-mediated signaling( GO:0009755 )
developmental maturation( GO:0021700 )
DNA binding( GO:0003677 )
GTP cyclohydrolase II activity( GO:0003935 )
chromatin silencing by small RNA( GO:0031048 )
histone H3-K9 methylation( GO:0051567 )
methylation-dependent chromatin silencing( GO:0006346 )
multidimensional cell growth( GO:0009825 )
negative regulation of flower development( GO:0009910 )
negative regulation of molecular function, epigenetic( GO:0045857 )
shoot morphogenesis( GO:0010016 )
transcription, DNA-dependent( GO:0006351 )
vernalization response( GO:0010048 )
chloroplast( GO:0009507 )
euchromatin( GO:0000791 )
nuclear heterochromatin( GO:0005720 )
Trait Ontology plant height( TO:0000207 )
tiller number( TO:0000346 )
leaf senescence( TO:0000249 )
plastochron( TO:0000735 )
leaf number( TO:0000241 )
leaf width( TO:0000370 )
leaf length( TO:0000135 )
flowering time( TO:0002616 )
days to heading( TO:0000137 )
growth and development trait( TO:0000357 )
growth hormone content( TO:0000476 )
salt tolerance( TO:0006001 )
Plant Ontology 4 leaf senescence stage( PO:0001054 )
Related Strains
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Phenotype images
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Last updated
Dec 12, 2025

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