Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HAM3 |
| Gene Symbol Synonym | OsHAM3, OsGRAS-21, OsGRAS21, GRAS-21, GRAS21, OsGRAS20, GRAS20 |
| CGSNL Gene Name | HAIRY MERISTEM 3 |
| Gene Name Synonym | hairy meristem 3, GRAS protein 21 |
| Protein Name | GRAS PROTEIN 21 |
| Allele | |
| Chromosome No. | 4 |
| Explanation | GRAS (GAI-RGA-SCR) plant-specific transcription factor. OsGRAS20 in Dutta et al. 2021. |
| Trait Class |
Reproductive organ - Heading date
Tolerance and resistance - Disease resistance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK100757
|
| MSU ID |
LOC_Os04g46860.1
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| RAP ID |
Os04g0555000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Dutta M., Saha A., Moin M., Kirti P.B.
Front Plant Sci 2021 12 777285 Genome-Wide Identification, Transcript Profiling and Bioinformatic Analyses of GRAS transcription factor Genes in Rice.
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Fan T., Li X., Yang W., Xia K., Ouyang J., Zhang M.
PLoS ONE 2015 10(5) e0125833 Rice osa-miR171c Mediates Phase Change from Vegetative to Reproductive Development and shoot apical meristem Maintenance by Repressing Four OsHAM Transcription Factors.
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Tian C, Wan P, Sun S, Li J, Chen M.
Plant Mol. Biol. 2004 54 519-532 Genome-wide analysis of the GRAS gene family in rice and Arabidopsis.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to abscisic acid stimulus( GO:0009737 )
defense response to fungus( GO:0050832 ) transcription, DNA-dependent( GO:0006351 ) regulation of transcription, DNA-dependent( GO:0006355 ) regulation of timing of transition from vegetative to reproductive phase( GO:0048510 ) |
| Trait Ontology |
flowering time( TO:0002616 )
days to heading( TO:0000137 ) shoot apical meristem development( TO:0006020 ) vegetative to reproductive phase transition trait( TO:0006021 ) sheath blight disease resistance( TO:0000255 ) abscisic acid sensitivity( TO:0000615 ) |
| Plant Ontology |
shoot apical meristem( PO:0020148 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jun 2, 2022 | |
