Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SUI2
Gene Symbol Synonym OsSUI2, ES5, OsES5
CGSNL Gene Name SHORTENED UPPERMOST INTERNODE 2
Gene Name Synonym Shortened Uppermost Internode 2, early leaf senescence 5
Protein Name
Allele sui2, es5
Chromosome No. 5
Explanation JQ173372. Q6I628. TO:0000755: shoot internode anatomy and morphology trait. OsPSS-1 homolog. a phosphatidylserine synthase (PSS) family protein.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK107427
MSU ID LOC_Os05g48060.1
RAP ID Os05g0554400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Mohammad Hasanuzzaman Rani, Liu Q., Yu N., Zhang Y., Wang B., Cao Y., Zhang Y., Md Anowerul Islam, Workie Anley Zegeye, Cao L., Cheng S.
Plant Mol. Biol. 2020  102(4-5)  501-515
es5 is involved in the regulation of phosphatidylserine synthesis and impacts on early senescence in rice (Oryza sativa L.).
Ma J., Cheng Z., Chen J., Shen J., Zhang B., Ren Y., Ding Y., Zhou Y., Zhang H., Zhou K., Wang J.L., Lei C., Zhang X., Guo X., Gao H., Bao Y., Wan J.M.
PLoS ONE 2016  11(4)  e0153119
Phosphatidylserine Synthase Controls Cell Elongation Especially in the Uppermost Internode in Rice by Regulation of Exocytosis.
Yin H., Gao P., Liu C., Yang J., Liu Z., Luo D.
Planta 2013  237(1)  15-27
SUI-family genes encode phosphatidylserine synthases and regulate stem development in rice.
TextPresso Search Search textpresso for SUI2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology CDP-diacylglycerol-serine O-phosphatidyltransferase activity( GO:0003882 )
endoplasmic reticulum membrane( GO:0005789 )
phosphatidylethanolamine biosynthetic process( GO:0006646 )
phosphatidylserine biosynthetic process( GO:0006659 )
integral to membrane( GO:0016021 )
stem cell maintenance( GO:0019827 )
regulation of shoot development( GO:0048831 )
internode patterning( GO:0080006 )
leaf senescence( GO:0010150 )
aging( GO:0007568 )
chloroplast organization( GO:0009658 )
Trait Ontology internode length( TO:0000145 )
plant height( TO:0000207 )
panicle size( TO:0006032 )
panicle length( TO:0000040 )
leaf senescence( TO:0000249 )
leaf color( TO:0000326 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
carotenoid content( TO:0000496 )
hydrogen peroxide content( TO:0000605 )
chloroplast development trait( TO:0002715 )
photosynthetic rate( TO:0001015 )
tiller number( TO:0000346 )
seed set percent( TO:0000455 )
1000-dehulled grain weight( TO:0000592 )
grain length( TO:0000734 )
Plant Ontology shoot internode( PO:0005005 )
stem elongation stage( PO:0007089 )
4 leaf senescence stage( PO:0001054 )
leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Apr 28, 2020


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