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Basic Information
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CGSNL Gene Symbol
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HWI2
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Gene Symbol Synonym
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Hwi2, OsHWI2, OsSub9, SUB9
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CGSNL Gene Name
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HYBRID WEAKNESS I 2
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Gene Name Synonym
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Subtilisin 9, Hybrid weakness i2
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Protein Name
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SUBTILISIN 9
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Allele
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hwi2
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Chromosome No.
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1
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Explanation
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a secreted putative subtilisin-like protease. Subtilisin Family (Peptidase_S8; PF00082). (http://rice.plantbiology.msu.edu/ca/gene_fams/27_87.shtml) GO:0090551: response to manganese starvation.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
Vegetative organ - Root
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100351
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MSU ID
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LOC_Os01g58290.1
LOC_Os01g58290.2
LOC_Os01g58290.3
LOC_Os01g58290.4
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RAP ID
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Os01g0795400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zheng K., Pang L., Xue X., Gao P., Zhao H., Wang Y., Han S.
Front Plant Sci 2022 13 943184
Genome-Wide Comprehensive Survey of the Subtilisin-Like Proteases Gene Family Associated With Rice Caryopsis Development.
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Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018 30(10) 2267-2285
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
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Chen C., Chen H., Lin Y.S., Shen J.B., Shan J.X., Qi P., Shi M., Zhu M.Z., Huang X.H., Feng Q., Han B., Jiang L., Gao J.P., Lin H.X.
Nat Commun 2014 5 3357
A two-locus interaction causes interspecific hybrid weakness in rice.
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Ouyang S., Zhu W., Hamilton J., Lin H., Campbell M., Childs K., Françoise Thibaud-Nissen, Renae L Malek, Lee Y., Zheng L., Orvis J., Haas B., Wortman J., C Robin Buell
Nucleic Acids Res. 2007 35(Database issue) D883-7
The TIGR Rice Genome Annotation Resource: improvements and new features.
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Lokesh P Tripathi, R Sowdhamini
BMC Genomics 2006 7 200
Cross genome comparisons of serine proteases in Arabidopsis and rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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serine-type endopeptidase activity( GO:0004252 )
cell wall( GO:0005618 )
response to heat( GO:0009408 )
root development( GO:0048364 )
response to manganese ion( GO:0010042 )
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Trait Ontology
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temperature response trait( TO:0000432 )
sterility or fertility trait( TO:0000392 )
root number( TO:0000084 )
manganese sensitivity( TO:0000073 )
plant height( TO:0000207 )
shoot development trait( TO:0000654 )
hybrid incompatibility( TO:0000036 )
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Plant Ontology
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root development stage( PO:0007520 )
shoot system( PO:0009006 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Oct 12, 2022
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Update info.