Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol HWI1
Gene Symbol Synonym 25L1
CGSNL Gene Name HYBRID WEAKNESS I 1
Gene Name Synonym LOC_Os11g07225-like 1, Hybrid weakness i1
Protein Name
Allele
Chromosome No. 11
Explanation 25L1 is the one of two leucine-rich repeat receptor-like kinase (LRR-RLK) genes in Hwi1 locus which induce hybrid weakness (Chen et al. 2014).
Trait Class Vegetative organ - Root
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Expression
Sequence/Locus
cDNA Accession No. AK103155
MSU ID LOC_Os11g07230.1
LOC_Os11g07230.2
LOC_Os11g07230.3
RAP ID Os11g0173500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Chen C., Chen H., Lin Y.S., Shen J.B., Shan J.X., Qi P., Shi M., Zhu M.Z., Huang X.H., Feng Q., Han B., Jiang L., Gao J.P., Lin H.X.
Nat Commun 2014  5  3357
A two-locus interaction causes interspecific hybrid weakness in rice.
Chen C., Chen H., Shan J.X., Zhu M.Z., Shi M., Gao J.P., Lin H.X.
Mol Plant 2013   
Genetic and Physiological Analysis of a Novel Type of Interspecific Hybrid Weakness in Rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology peptide receptor activity( GO:0001653 )
transmembrane receptor protein serine/threonine kinase activity( GO:0004675 )
ATP binding( GO:0005524 )
plasma membrane( GO:0005886 )
transmembrane receptor protein serine/threonine kinase signaling pathway( GO:0007178 )
integral to membrane( GO:0016021 )
ubiquitin protein ligase binding( GO:0031625 )
protein amino acid autophosphorylation( GO:0046777 )
root development( GO:0048364 )
response to heat( GO:0009408 )
plasmodesma( GO:0009506 )
hormone-mediated signaling( GO:0009755 )
Trait Ontology temperature response trait( TO:0000432 )
sterility or fertility trait( TO:0000392 )
root number( TO:0000084 )
plant height( TO:0000207 )
shoot development trait( TO:0000654 )
hybrid incompatibility( TO:0000036 )
Plant Ontology root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Oct 12, 2022

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