Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SSG4
Gene Symbol Synonym OsSSG4
Gene Name Synonym substandard starch grain4, substandard starch grain 4
Protein Name
Allele ssg4, SSG4-1, SSG4-2, SSG4-3
Chromosome No. 1
Explanation a DUF490-Containing Protein. AB856288.
Trait Class Coloration - Chlorophyll
Seed - Morphological traits - Endosperm
cDNA Accession No. AK063507
MSU ID LOC_Os01g08420.1
RAP ID Os01g0179400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Zhao Y., Qiang C., Wang X., Chen Y., Deng J., Jiang C., Sun X., Chen H., Li J., Piao W., Zhu X., Zhang Z., Zhang H., Li Z., Li J.
Sci Rep 2019  9(1)  2541
New alleles for chlorophyll content and stay-green traits revealed by a genome wide association study in rice (Oryza sativa).
Matsushima R.a, Maekawa M.a, Kusano M.b, Kondo H.a, Fujita N.c, Kawagoe Y.d, Sakamoto W.a
Plant Physiol. 2014  164  623-636
Amyloplast-localized SUBSTANDARD STARCH GRAIN4 protein influences the size of starch grains in rice endosperm
TextPresso Search Search textpresso for SSG4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology amyloplast( GO:0009501 )
chloroplast stroma( GO:0009570 )
Trait Ontology seed width( TO:0000149 )
starch grain size( TO:0002655 )
chalky endosperm( TO:0000266 )
chloroplast development trait( TO:0002715 )
chlorophyll content( TO:0000495 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Aug 29, 2019