Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | UBC12 |
| Gene Symbol Synonym | OsUBC12 |
| CGSNL Gene Name | UBIQUITIN-CONJUGATING ENZYME 12 |
| Gene Name Synonym | Ubiquitin-conjugating enzyme 12 |
| Protein Name | UBIQUITIN-CONJUGATING ENZYME 12 |
| Allele | osubc12, osubc12-ks1, osubc12-ks2, osubc12-2, osubc12-3, osubc12-10 |
| Chromosome No. | 5 |
| Explanation | GO:1901800: positive regulation of proteasomal protein catabolic process. |
| Trait Class |
Biochemical character
Tolerance and resistance - Stress tolerance Character as QTL - Germination |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK111857
|
| MSU ID |
LOC_Os05g38550.1
LOC_Os05g38550.2 |
| RAP ID |
Os05g0460200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Zhang C., Wang H., Tian X., Lin X., Han Y., Han Z., Sha H., Liu J., Liu J., Zhang J., Bu Q., Fang J.
Nat Commun 2024 15(1) 2211 A transposon insertion in the promoter of OsUBC12 enhances cold tolerance during japonica rice germination.
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E Z., Zhang Y., Li T., Wang L., Zhao H.
PLoS ONE 2015 10(4) e0122621 Characterization of the Ubiquitin-Conjugating Enzyme Gene Family in Rice and Evaluation of Expression Profiles under Abiotic Stresses and Hormone Treatments.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 ) response to abscisic acid stimulus( GO:0009737 ) ligase activity( GO:0016874 ) regulation of seed germination( GO:0010029 ) abscisic acid mediated signaling( GO:0009738 ) seed germination( GO:0009845 ) response to cold( GO:0009409 ) protein K48-linked ubiquitination( GO:0070936 ) proteasomal protein catabolic process( GO:0010498 ) |
| Trait Ontology |
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 ) abscisic acid sensitivity( TO:0000615 ) cold tolerance( TO:0000303 ) germination rate( TO:0000430 ) germinability at low temperature( TO:0000483 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Aug 29, 2024 | |
