Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | UBC11 |
| Gene Symbol Synonym | OsUBC11 |
| CGSNL Gene Name | UBIQUITIN-CONJUGATING ENZYME 11 |
| Gene Name Synonym | Ubiquitin-conjugating enzyme 11 |
| Protein Name | UBIQUITIN-CONJUGATING ENZYME 11 |
| Allele | osubc11, osubc11-1, osubc11-4, osubc11-9 |
| Chromosome No. | 1 |
| Explanation | GO:0060918: auxin transport. TO:0020106: Indole-3-acetic acid content. |
| Trait Class |
Reproductive organ - panicle
Vegetative organ - Root Biochemical character Vegetative organ - Culm Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK112030
|
| MSU ID |
LOC_Os01g62244.1
LOC_Os01g62244.2 LOC_Os01g62244.3 |
| RAP ID |
Os01g0839700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Han Y., Zhang C., Sha H., Wang X., Yu Y., Liu J., Zhao G., Wang J., Qiu G., Xu X., Fang J.
Rice (N Y) 2023 16(1) 9 Ubiquitin-conjugating enzyme OsUBC11 Affects the Development of Roots via Auxin Pathway.
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E Z., Zhang Y., Li T., Wang L., Zhao H.
PLoS ONE 2015 10(4) e0122621 Characterization of the Ubiquitin-Conjugating Enzyme Gene Family in Rice and Evaluation of Expression Profiles under Abiotic Stresses and Hormone Treatments.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 ) ligase activity( GO:0016874 ) response to auxin stimulus( GO:0009733 ) root development( GO:0048364 ) auxin mediated signaling pathway( GO:0009734 ) pollen development( GO:0009555 ) regulation of auxin biosynthetic process( GO:0010600 ) nucleus( GO:0005634 ) |
| Trait Ontology |
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 ) auxin sensitivity( TO:0000163 ) root development trait( TO:0000656 ) plant height( TO:0000207 ) auxin content( TO:0002672 ) lateral root length( TO:0001012 ) root length( TO:0000227 ) internode length( TO:0000145 ) pollen abortion type( TO:0000218 ) seed set percent( TO:0000455 ) panicle length( TO:0000040 ) |
| Plant Ontology |
stem( PO:0009047 )
inflorescence( PO:0009049 ) root development stage( PO:0007520 ) pollen development stage( PO:0001007 ) root( PO:0009005 ) anther( PO:0009066 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jun 19, 2023 | |
