Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | UBC3 |
| Gene Symbol Synonym | OsUBC3, OsSCE1c, SCE1c, OsSCE1c.1, OsSCE1c.2, OsSCE3, SCE3 |
| CGSNL Gene Name | UBIQUITIN-CONJUGATING ENZYME 3 |
| Gene Name Synonym | Ubiquitin-conjugating enzyme 3, E2 SUMO conjugation enzyme 1c, SUMO conjugation enzyme 1c, E2 protein SCE1c, SUMO-conjugating enzyme 3 |
| Protein Name | UBIQUITIN-CONJUGATING ENZYME 3 |
| Allele | |
| Chromosome No. | 4 |
| Explanation | OsSCEc in Rosa et al. 2018. OsSCE3 in Park et al. 2021. |
| Trait Class |
Biochemical character
Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK121581
|
| MSU ID |
LOC_Os04g49130.1
LOC_Os04g49130.2 |
| RAP ID |
Os04g0580400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Park H.J., Jung H.M., Lee A., Jo S.H., Lee H.J., Kim H.S., Jung C.K., Min S.R., Cho H.S.
Int J Mol Sci 2021 22(16) SUMO Modification of OsFKBP20-1b Is Integral to Proper Pre-mRNA Splicing upon Heat Stress in Rice.
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Rosa M.T.G., Almeida D.M., Pires I.S., da Rosa Farias D., Martins A.G., da Maia LC., de Oliveira AC., Saibo N.J.M., Oliveira M.M., Abreu I.A.
BMC Plant Biol. 2018 18(1) 349 Insights into the transcriptional and post-transcriptional regulation of the rice SUMOylation machinery and into the role of two rice SUMO proteases.
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E Z., Zhang Y., Li T., Wang L., Zhao H.
PLoS ONE 2015 10(4) e0122621 Characterization of the Ubiquitin-Conjugating Enzyme Gene Family in Rice and Evaluation of Expression Profiles under Abiotic Stresses and Hormone Treatments.
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Chaikam V., Dale T Karlson
BMB Rep 2010 43(2) 103-9 Response and transcriptional regulation of rice SUMOylation system during development and stress conditions.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to auxin stimulus( GO:0009733 )
response to cold( GO:0009409 ) response to salt stress( GO:0009651 ) response to abscisic acid stimulus( GO:0009737 ) SUMO ligase activity( GO:0019789 ) nucleoplasm( GO:0005654 ) cytoplasm( GO:0005737 ) |
| Trait Ontology |
auxin sensitivity( TO:0000163 )
cold tolerance( TO:0000303 ) salt tolerance( TO:0006001 ) abscisic acid sensitivity( TO:0000615 ) |
| Plant Ontology |
shoot apical meristem( PO:0020148 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Mar 11, 2022 | |
