Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PRD1 |
| Gene Symbol Synonym | OsSTA121, STA121, OsPRD1 |
| CGSNL Gene Name | PUTATIVE RECOMBINATION INITIATION DEFECT 1 |
| Gene Name Synonym | |
| Protein Name | |
| Allele | prd1, prd1-1, prd1-2, prd1-3 |
| Chromosome No. | 4 |
| Explanation | a mature anther-preferentially expressed gene. GO:0035825: homologous recombination. GO:0090306: meiotic spindle assembly. PO:0030123: panicle inflorescence. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Female sterility Reproductive organ - Pollination, fertilization, fertility - Meiosis Reproductive organ - Spikelet, flower, glume, awn |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK108606
|
| MSU ID |
LOC_Os04g28020.1
|
| RAP ID |
Os04g0347800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Wan Y., Liu X., Wang N., Zeng Z., Jiang Y.
Curr Issues Mol Biol 2024 46(11) 12978-12993 Identification and Gene Fine Mapping of the Bisexual Sterility Mutant <i>Meiosis Abnormal Bisexual Sterility 1</i> in Rice.
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Shi W., Ji J., Xue Z., Zhang F., Miao Y., Yang H., Tang D., Du G., Li Y., Shen Y., Cheng Z.
New Phytol. 2021 230(2) 585-600 prd1, a homologous recombination initiation factor, is involved in spindle assembly in rice meiosis.
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Ling S., Chen C., Wang Y., Sun X., Lu Z., Ouyang Y., Yao J.
BMC Genomics 2015 16 101 The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
kinetochore organization( GO:0051383 )
kinetochore binding( GO:0043515 ) meiotic DNA double-strand break formation( GO:0042138 ) meiotic cell cycle( GO:0051321 ) spindle assembly( GO:0051225 ) chromosome segregation( GO:0007059 ) kinetochore assembly( GO:0051382 ) kinetochore( GO:0000776 ) chromosome( GO:0005694 ) |
| Trait Ontology |
male sterility( TO:0000437 )
female sterility( TO:0000358 ) |
| Plant Ontology |
anther( PO:0009066 )
inflorescence( PO:0009049 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| May 27, 2025 | |
