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Basic Information
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CGSNL Gene Symbol
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ELF3.2
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Gene Symbol Synonym
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ELF3_chr.1, OsELF3.2, ELF3.2, OsELF3-2, ELF3-2, OsELF3b, ELF3b
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CGSNL Gene Name
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EARLY FLOWERING 3.2
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Gene Name Synonym
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EARLY FLOWERING3.2, ELF3 homolog 2
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Protein Name
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Allele
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oself3.2, elf3-2, oself3-2
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Chromosome No.
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1
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Explanation
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Q657D6. a rice ortholog of Arabidopsis gene for circadian clock component. ortholog of Arabidopsis circadian gene ELF3. an evening complex component. GO:2000028: regulation of photoperiodism, flowering. GO:1900150: regulation of defense response to fungus.
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Trait Class
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Reproductive organ - Heading date
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK065173
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MSU ID
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LOC_Os01g38530.1
LOC_Os01g38530.2
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RAP ID
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Os01g0566100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Luo H., Zou H., Lin S., Liu J., Zhou G., Gao L., Huang J., Li J., Gao J., Ma C.
Int J Mol Sci 2026 27(2)
Multiplex Editing of <i>OsMads26</i>, <i>OsBsr-d1</i>, <i>OsELF3-2</i> and <i>OsERF922</i> with CRISPR/Cas9 Confers Enhanced Resistance to Pathogens and Abiotic Stresses and Boosts grain yield in Rice (<i>Oryza sativa</i>).
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Luo M., Zhu S., Dang H., Wen Q., Niu R., Long J., Wang Z., Tong Y., Ning Y., Yuan M., Xu G.
Nat Commun 2025 16(1) 1159
Genetically-encoded targeted protein degradation technology to remove endogenous condensation-prone proteins and improve crop performance.
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Yang C., Luo A., Lu H.P., Davis S.J., Liu J.X.
Science Bulletin 2024 69(1) 59-71
Diurnal regulation of alternative splicing associated with thermotolerance in rice by two glycine-rich RNA-binding proteins.
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Cai Z., Zhang Y., Tang W., Chen X., Lin C., Liu Y., Ye Y., Wu W., Duan Y.
Front Plant Sci 2022 13 853042
LUX ARRHYTHMO Interacts With ELF3a and ELF4a to Coordinate Vegetative Growth and Photoperiodic Flowering in Rice.
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Andrade L., Lu Y., Cordeiro A., Costa J.M.F., Wigge P.A., Saibo N.J.M., Jaeger K.E.
Proc. Natl. Acad. Sci. U.S.A. 2022 119(26) e2122582119
The evening complex integrates photoperiod signals to control flowering in rice.
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Pearce S.
Proc. Natl. Acad. Sci. U.S.A. 2022 119(29) e2208745119
Plants change their clocks to flower at the right time.
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Yin M., Ma H., Wang M., Chu G., Liu Y., Xu C., Zhang X., Wang D., Chen S.
Sci Rep 2021 11(1) 15026
Transcriptome analysis of flowering regulation by sowing date in Japonica Rice (Oryza sativa L.).
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Zhang K., Xu W., Wang C., Yi X., Su Z.
Plant Signal Behav 2017 12(3) e1286438
Differential deposition of H2A.Z in rice seedling tissue during the day-night cycle.
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Sakuraba Y., Han S.H., Yang H.J., Piao W., Paek N.C.
Plant Mol. Biol. 2016 92(1-2) 223-34
Mutation of Rice EARLY FLOWERING3.1 (OsELF3.1) delays leaf senescence in rice.
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Ning Y., Shi X., Wang R., Fan J., Park C.H., Zhang C., Zhang T., Ouyang X., Li S., Wang G.L.
Mol Plant 2015
OsELF3-2, an ortholog of Arabidopsis ELF3, interacts with the E3 ligase APIP6 and negatively regulates immunity against Magnaporthe oryzae in rice.
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Matsuzaki J., Kawahara Y., Izawa T.
Plant Cell 2015 27(3) 633-48
Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions.
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Zhao J., Huang X., Ouyang X., Chen W., Du A., Zhu L., Wang S., Deng X.W., Li S.
PLoS ONE 2012 7(8) e43705
OsELF3-1, an Ortholog of Arabidopsis EARLY FLOWERING 3, Regulates Rice Circadian Rhythm and Photoperiodic Flowering.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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circadian rhythm( GO:0007623 )
response to light stimulus( GO:0009416 )
response to temperature stimulus( GO:0009266 )
photoperiodism, flowering( GO:0048573 )
response to heat( GO:0009408 )
negative regulation of defense response( GO:0031348 )
flower development( GO:0009908 )
defense response to fungus( GO:0050832 )
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Trait Ontology
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flowering time( TO:0002616 )
days to heading( TO:0000137 )
temperature response trait( TO:0000432 )
light sensitivity( TO:0000075 )
heat tolerance( TO:0000259 )
blast disease( TO:0000074 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Aug 13, 2026
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Update info.