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Basic Information
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CGSNL Gene Symbol
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SHMT3
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Gene Symbol Synonym
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OsSHM3, SHM3, OsSHMT3, OsSHTM5, SHTM5
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CGSNL Gene Name
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SERINE HYDROXYMETHYLTRANSFERASE 3
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Gene Name Synonym
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serine hydroxymethyltransferase 3, serine hydroxymethyltransferase-5
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Protein Name
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SERINE HYDROXYMETHYLTRANSFERASE 3
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Allele
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Chromosome No.
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12
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Explanation
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GO:0035999: tetrahydrofolate interconversion. CT853747, CK063929, CI307114. OsSHTM5 in Mishra et al. 2019.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK101088
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MSU ID
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LOC_Os12g22030.1
LOC_Os12g22030.2
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RAP ID
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Os12g0409000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Pan T., Jin H., Zhou C., Yan M.
Plants (Basel) 2024 13(8)
Rice Serine Hydroxymethyltransferases: Evolution, Subcellular Localization, Function and Perspectives.
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Wang R.Y., Liu L.H., Zhao F.J., Huang X.Y.
Int J Mol Sci 2022 23(11)
Local and Systemic Response to Heterogeneous Sulfate Resupply after Sulfur Deficiency in Rice.
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Mishra P., Jain A., Takabe T., Tanaka Y., Negi M., Singh N., Jain N., Mishra V., Maniraj R., Krishnamurthy S.L., Sreevathsa R., Singh N.K., Rai V.
Front Plant Sci 2019 10 217
Heterologous Expression of Serine Hydroxymethyltransferase-3 From Rice Confers Tolerance to Salinity Stress in <i>E. coli</i> and Arabidopsis.
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Wang D., Liu H., Li S., Zhai G., Shao J., Tao Y.
J Integr Plant Biol 2015
Characterization and molecular cloning of a Serine hydroxymethyltransferase 1 (osshm1) in rice.
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Zhang Y., Sun K., Francisco J Sandoval, Santiago K., Roje S.
Biochem. J. 2010 430(1) 97-105
One-carbon metabolism in plants: characterization of a plastid serine hydroxymethyltransferase.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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glycine hydroxymethyltransferase activity( GO:0004372 )
glycine metabolic process( GO:0006544 )
pyridoxal phosphate binding( GO:0030170 )
response to starvation( GO:0042594 )
cellular response to sulfate starvation( GO:0009970 )
response to abscisic acid stimulus( GO:0009737 )
response to jasmonic acid stimulus( GO:0009753 )
cytoplasm( GO:0005737 )
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Trait Ontology
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sulfur sensitivity( TO:0000007 )
abscisic acid sensitivity( TO:0000615 )
jasmonic acid sensitivity( TO:0000172 )
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Plant Ontology
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seed( PO:0009010 )
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Related Strains
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-
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Phenotype images
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Last updated
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Sep 17, 2024
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Update info.