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Basic Information
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CGSNL Gene Symbol
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NRFG4
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Gene Symbol Synonym
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OsRH52A, RH52A, OsNRFG4
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CGSNL Gene Name
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NEO-TETRAPLOID RICE FERTILITY RELATED GENE 4
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Gene Name Synonym
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RNA helicase 52A, neo-tetraploid rice fertility related gene 4
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Protein Name
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Allele
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nrfg4, rh52a, rh52a-m1, rh52a-m2
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Chromosome No.
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6
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Explanation
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Q0DB53. DEAD-box RNA helicase protein.
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Trait Class
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Vegetative organ - Culm
Reproductive organ
Reproductive organ - panicle
Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Seed - Morphological traits
Character as QTL - Yield and productivity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK106474
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MSU ID
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LOC_Os06g40020.1
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RAP ID
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Os06g0602400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Huang J., Qiao Z., Yu H., Lu Z., Chen W., Lu J., Wu J., Bao Y., Shahid M.Q., Liu X.
J. Exp. Bot. 2024
OsRH52A, a DEAD-Box protein, is required for embryo sac development by regulating functional megaspore specification in rice.
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Ali A., Riaz A., Wu X.
J. Exp. Bot. 2024 75(16) 4684-4688
Unlocking fertility in the female gametophyte: a DEAD-box RNA helicase is essential for embryo sac development and seed setting.
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Yu H., Shahid M.Q., Li Q., Li Y., Li C., Lu Z., Wu J., Zhang Z., Liu X.
Rice (N Y) 2020 13(1) 32
Production Assessment and Genome Comparison Revealed High Yield Potential and Novel Specific Alleles Associated with Fertility and Yield in Neo-Tetraploid Rice.
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Xu J., Liu C., Li M., Hu J., Zhu L., Zeng D., Yang Y., Peng Y., Ruan B., Guo L., Li H.
Gene 2015 555(2) 318-28
A rice DEAD-box RNA helicase protein, OsRH17, suppresses 16S ribosomal RNA maturation in Escherichia coli.
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Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013 64(7) 1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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RNA binding( GO:0003723 )
helicase activity( GO:0004386 )
ATP binding( GO:0005524 )
embryo sac morphogenesis( GO:0048314 )
cytoplasm( GO:0005737 )
nucleus( GO:0005634 )
female gamete generation( GO:0007292 )
embryo sac development( GO:0009553 )
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Trait Ontology
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yield trait( TO:0000371 )
seed set percent( TO:0000455 )
pollen fertility( TO:0000421 )
panicle length( TO:0000040 )
filled grain number( TO:0000447 )
1000-dehulled grain weight( TO:0000592 )
plant height( TO:0000207 )
panicle number( TO:0000152 )
female sterility( TO:0000358 )
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Plant Ontology
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plant egg cell( PO:0020094 )
floral organ( PO:0025395 )
plant ovary( PO:0009072 )
megagametophyte development stage( PO:0007621 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Dec 3, 2024
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Update info.