Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol OFP4
Gene Symbol Synonym OsOFP4, OsOFP06, OsOFP6, OFP6
CGSNL Gene Name OVATE FAMILY PROTEIN 4
Gene Name Synonym OVATE family protein 4, ovate family protein 6, OVATE-domain containing protein 6
Protein Name OVATE FAMILY PROTEIN 4
Allele Osofp6-D, Osofp6-D-kn1, Osofp6-D-kn2
Chromosome No. 1
Explanation OsOFP06 in Yu et al. 2015. OsOFP6 in Ma et al. 2017, Sun et al. 2020, Zhu et al. 2024. GO:2000652: regulation of secondary cell wall biogenesis. TO:0000993: cellulose content. GO:1901141: regulation of lignin biosynthetic process. GO:2001006: regulation of cellulose biosynthetic process. PO:0030123: panicle inflorescence.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - panicle
Reproductive organ - Pollination, fertilization, fertility
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK064237
MSU ID LOC_Os01g60810.1
RAP ID Os01g0823500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhu X., Li Y., Zhao X., Feng Y., Bao Z., Liu W., Li F.
Int J Mol Sci 2024  25(5) 
<i>Osofp6</i> Overexpression Alters Plant Architecture, grain shape, and Seed Fertility.
Sun X., Ma Y., Yang C., Li J.
Plant Mol. Biol. 2020  104(3)  249-261
Rice OVATE family protein 6 regulates leaf angle by modulating secondary cell wall biosynthesis.
Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017  68(17)  4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
Yu H., Jiang W., Liu Q., Zhang H., Piao M., Chen Z., Bian M.
PLoS ONE 2015  10(3)  e0118966
Expression pattern and subcellular localization of the ovate protein family in rice.
Liu D., Sun W., Yuan Y., Zhang N., Hayward A., Liu Y., Wang Y.
Ann. Bot. 2014  113(7)  1219-33
Phylogenetic analyses provide the first insights into the evolution of OVATE family proteins in land plants.
DB Reference
Gramene ID -
Ontologies
Gene Ontology membrane( GO:0016020 )
response to brassinosteroid stimulus( GO:0009741 )
response to gibberellin stimulus( GO:0009739 )
brassinosteroid mediated signaling( GO:0009742 )
gibberellic acid mediated signaling( GO:0009740 )
cellulose biosynthetic process( GO:0030244 )
lignin biosynthetic process( GO:0009809 )
xylan biosynthetic process( GO:0045492 )
secondary cell wall biogenesis( GO:0009834 )
nucleus( GO:0005634 )
response to cold( GO:0009409 )
response to water deprivation( GO:0009414 )
auxin polar transport( GO:0009926 )
lateral root development( GO:0048527 )
lateral root formation( GO:0010311 )
regulation of auxin mediated signaling pathway( GO:0010928 )
Trait Ontology cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
plant height( TO:0000207 )
grain shape( TO:0002730 )
lateral root length( TO:0001012 )
lateral root number( TO:0001013 )
hydrogen peroxide content( TO:0000605 )
leaf angle( TO:0000206 )
leaf lamina joint bending( TO:0002688 )
lignin content( TO:0000731 )
tiller number( TO:0000346 )
brassinosteroid sensitivity( TO:0002677 )
gibberellic acid sensitivity( TO:0000166 )
leaf sheath length( TO:0002689 )
seed fertility( TO:0000639 )
seed set percent( TO:0000455 )
germination rate( TO:0000430 )
panicle size( TO:0006032 )
seed length( TO:0000146 )
seed width( TO:0000149 )
Plant Ontology glume( PO:0009039 )
leaf( PO:0025034 )
stem internode( PO:0020142 )
root( PO:0009005 )
leaf sheath( PO:0020104 )
inflorescence( PO:0009049 )
Related Strains
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Phenotype images
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Last updated
Aug 29, 2024

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