Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol LOX3
Gene Symbol Synonym Lox3*, lox3(t), LOX-3, Lox3, OsLOX4, LOX4
CGSNL Gene Name LIPOXYGENASE 3
Gene Name Synonym Lipoxygenase3, Lipoxygenase 3, Lipoxygenase-3, Putative lipoxygenase 3, Lipoxygenase 4
Protein Name LIPOXYGENASE 3
Allele
Chromosome No. 3
Explanation recessive gene lox3 causes deficiency of enzyme lipoxygenase-3. Lipoxygenase produces stale flavor during the storage of grain making reduce grain quality seriously. Thai rice cultivar Daw Dam lacks LOX-3 in its seeds. PO:0009010; seed. Q7G794. OsLOX4 in Marla and Singh 2012. FJ660623, FJ660624. AB571658 (LOX3 pseudogene of cultivar Daw Dam).
Trait Class Seed - Physiological traits - Taste
Expression
Sequence/Locus
cDNA Accession No. FJ660623
MSU ID LOC_Os03g49350.1
RAP ID Os03g0700400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Marla S.S., Singh V.K.
Funct. Integr. Genomics 2012  12(2)  265-75
LOX genes in blast fungus (Magnaporthe grisea) resistance in rice.
Shirasawa,K., Takeuchi,Y., Ebitani,T. and Suzuki,Y.
Breeding Science 2008  58  169-176
Identification of gene for rice (Oryza sativa) seed lipoxygenase-3 involved in the generation of stale flavor and development of SNP markers for the lipoxygenase-3 deficiency
Suzuki, Y., K. Ise and T. Nagamine
RGN 2000  17  13-14
Geographical variation of the gene, (lox3(t)), causing lipoxygenase-3 deficiency in Asian rice varieties.
Suzuki, Y., Y. Iwai, I. Honda and U. Matsukura
Breeding Science 1998  48(Suppl. 1)  167
Analysis for content of volatiles in stored rice grain from varieties with and without lipoxygenase-3 in seeds.
Yasuhiro Suzuki. and Ushio Matsukura.
Plant Sci. 1997  125  119-126
Lipoxygenase activity in maturing and germinating rice seeds with and without lipoxygenase-3 in mature seeds.
Peng, Y.L., Y. Qin, Y. Yang and J. Huang
Rice Genetics III. IRRI, Manila, Philippines. 1996    835-841.
Isolation and characterization of lipoxygenases from rice induced by incompatible infection of rice blast fungus, Magnaporthe grisea.
Suzuki, Y., M. Ohsawa, J. Terao and U. Matsukura
Breeding Science 1996  46(Suppl. 1)  153
Development of lipoxygenases in embryo and seedling of rice variety lacking lipoxygenase-3 in its seed during ripening and germination.
Suzuki, Y., T. Nagamine, A. Kobayashi and K. Ohtsubo
Japan. J. Breed. 1993  43  405-409.
Detection of a new rice variety lacking lipoxygenase-3 by monoclonal antibodies.
Suzuki, Y., T. Nagamine and K. Okuno
Japan. J. Breed. 1993  43(Suppl. 2)  142
Genetic analysis of lipoxygenase-3 content in rice embryos by monoclonal antibodies.(in Japanese)
TextPresso Search Search textpresso for LOX3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060509
Ontologies
Gene Ontology iron ion binding( GO:0005506 )
oxylipin biosynthetic process( GO:0031408 )
oxidation reduction( GO:0055114 )
lipoxygenase activity( GO:0016165 )
Trait Ontology seed composition based quality trait( TO:0000488 )
Plant Ontology seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
Nov 26, 2015


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