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Basic Information
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CGSNL Gene Symbol
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UBC13
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Gene Symbol Synonym
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OsUbc13, Ubc13, OsUBC47, UBC47
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CGSNL Gene Name
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UBIQUITIN-CONJUGATING ENZYME 13
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Gene Name Synonym
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Ubiquitin conjugating enzyme 13, Ubiquitin-conjugating enzyme 47
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Protein Name
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UBIQUITIN-CONJUGATING ENZYME 13
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Allele
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Chromosome No.
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1
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Explanation
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closely related to AtUBC13B. OsUBC47 in Zhang et al. 2015. GO:0140426: pathogen-associated molecular pattern receptor signaling pathway. GO:1903426: regulation of reactive oxygen species biosynthetic process.
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Trait Class
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Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK122067
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MSU ID
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LOC_Os01g48280.1
LOC_Os01g48280.2
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RAP ID
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Os01g0673600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Liu J., Nie B., Yu B., Xu F., Zhang Q., Wang Y., Xu W.
Plant Biotechnol. J. 2023 21(8) 1590-1610
Rice ubiquitin-conjugating enzyme OsUbc13 negatively regulates immunity against pathogens by enhancing the activity of OsSnRK1a.
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Liu J., Liao W., Nie B., Zhang J., Xu W.
Plant J. 2021
OsUEV1B, an Ubc enzyme variant protein, is required for phosphate homeostasis in rice.
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Wang Q., Zang Y., Zhou X., Xiao W.
BMC Plant Biol. 2017 17(1) 126
Characterization of four rice Uev1 genes required for Lys63-linked polyubiquitination and distinct functions.
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Wang S., Wu K., Qian Q., Liu Q., Li Q., Pan Y., Ye Y., Liu X., Wang J., Zhang J., Li S., Wu Y., Fu X.
Cell Res. 2017 27(9) 1142-1156
Non-canonical regulation of SPL transcription factors by a human OTUB1-like deubiquitinase defines a new plant type rice associated with higher grain yield.
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E Z., Zhang Y., Li T., Wang L., Zhao H.
PLoS ONE 2015 10(4) e0122621
Characterization of the Ubiquitin-Conjugating Enzyme Gene Family in Rice and Evaluation of Expression Profiles under Abiotic Stresses and Hormone Treatments.
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Wang Y., Xu M.Y., Liu J.P., Wang M.G., Yin H.Q., Tu J.M.
J Zhejiang Univ Sci B 2014 15(7) 624-37
Molecular identification and interaction assay of the gene (OsUbc13) encoding a ubiquitin-conjugating enzyme in rice.
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Zang Y., Wang Q., Xue C., Li M., Wen R., Xiao W.
Rice (N Y) 2012 5 24-34
Rice ubc13, a candidate housekeeping gene, is required for K63-linked polyubiquitination and tolerance to DNA damage
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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acid-amino acid ligase activity( GO:0016881 )
response to gibberellin stimulus( GO:0009739 )
seed development( GO:0048316 )
response to DNA damage stimulus( GO:0006974 )
protein K63-linked ubiquitination( GO:0070534 )
jasmonic acid mediated signaling pathway( GO:0009867 )
salicylic acid mediated signaling pathway( GO:0009863 )
defense response to bacterium( GO:0042742 )
defense response to fungus( GO:0050832 )
response to molecule of fungal origin( GO:0002238 )
response to molecule of bacterial origin( GO:0002237 )
negative regulation of defense response( GO:0031348 )
regulation of hydrogen peroxide biosynthetic process( GO:0010728 )
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Trait Ontology
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gibberellic acid sensitivity( TO:0000166 )
seed development trait( TO:0000653 )
mimic response( TO:0000063 )
hydrogen peroxide content( TO:0000605 )
blast disease( TO:0000074 )
bacterial blight disease resistance( TO:0000175 )
jasmonic acid content( TO:0002668 )
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Plant Ontology
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seed development stage( PO:0001170 )
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Related Strains
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Phenotype images
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Last updated
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Aug 25, 2023
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Update info.