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Basic Information
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CGSNL Gene Symbol
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LYL1
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Gene Symbol Synonym
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OsChl P, CHL P, ChlP, OsGGRI, GGRI, OsGGR, GGR, OsGGR1, GGR1, OsGGR1/LYL1/OsChl P
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CGSNL Gene Name
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LIGHT-INDUCED YELLOW LEAF 1
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Gene Name Synonym
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Geranylgeranyl reductase, Light-Induced Yellow Leaf 1, Geranylgeranyl Reductase I, Geranylgeranyl-diphosphate reductase, geranylgeranyl reductase 1
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Protein Name
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Allele
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502ys, lyl1-1, lyl1-2
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Chromosome No.
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2
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Explanation
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Q6Z2T6. KF305678, KF305679. GO:0080183: response to photooxidative stress. an AtGGR (At1g74470) orthologue.
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Trait Class
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Biochemical character
Vegetative organ - Leaf
Coloration - Chlorophyll
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK061968
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MSU ID
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LOC_Os02g51080.1
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RAP ID
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Os02g0744900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Jin X., Baysal C., Drapal M., Sheng Y., Huang X., He W., Shi L., Capell T., Fraser P.D., Christou P., Zhu C.
Plants (Basel) 2021 10(7)
The Coordinated Upregulated Expression of Genes Involved in MEP, Chlorophyll, Carotenoid and Tocopherol Pathways, Mirrored the Corresponding Metabolite Contents in Rice Leaves during De-Etiolation.
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Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
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Kimura E., Abe T., Murata K., Kimura T., Otoki Y., Yoshida T., Miyazawa T., Nakagawa K.
Sci Rep 2018 8(1) 1870
Identification of OsGGR2, a second geranylgeranyl reductase involved in alpha-tocopherol synthesis in rice.
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Zhou F., Wang C.Y., Gutensohn M., Jiang L., Zhang P., Zhang D., Dudareva N., Lu S.
Proc. Natl. Acad. Sci. U.S.A. 2017 114(26) 6866-6871
A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice.
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Inagaki N., Kinoshita K., Kagawa T., Tanaka A., Ueno O., Shimada H., Takano M.
PLoS ONE 2015 10(8) e0135408
Phytochrome B Mediates the Regulation of Chlorophyll Biosynthesis through Transcriptional Regulation of ChlH and GUN4 in Rice Seedlings.
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Wang P., Li C., Wang Y., Huang R., Sun C., Xu Z., Zhu J., Gao X., Deng X., Wang P.
Springerplus 2014 3 201
Identification of a Geranylgeranyl reductase gene for chlorophyll synthesis in rice.
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Zhou Y., Gong Z., Yang Z., Yuan Y., Zhu J., Wang M., Yuan F., Wu S., Wang Z., Yi C., Xu T., Ryom M., Gu M., Liang G.
PLoS ONE 2013 8(9) e75299
Mutation of the light-induced yellow leaf 1 gene, which encodes a geranylgeranyl reductase, affects chlorophyll biosynthesis and light sensitivity in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to reactive oxygen species( GO:0000302 )
response to light stimulus( GO:0009416 )
chloroplast thylakoid membrane( GO:0009535 )
response to high light intensity( GO:0009644 )
response to low light intensity stimulus( GO:0009645 )
geranylgeranyl reductase activity( GO:0045550 )
regulation of protein amino acid dephosphorylation( GO:0035304 )
chloroplast membrane( GO:0031969 )
photosynthesis, light reaction( GO:0019684 )
cysteine biosynthetic process( GO:0019344 )
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor( GO:0016628 )
chlorophyll biosynthetic process( GO:0015995 )
vitamin E biosynthetic process( GO:0010189 )
chloroplast organization( GO:0009658 )
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Trait Ontology
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chlorophyll content( TO:0000495 )
light sensitivity( TO:0000075 )
leaf color( TO:0000326 )
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Plant Ontology
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leaf( PO:0025034 )
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Related Strains
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Phenotype images
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Last updated
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Mar 7, 2022
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Update info.