Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PP2C40 |
| Gene Symbol Synonym | OsPP2C40, OsPP65, PP65 |
| CGSNL Gene Name | PROTEIN PHOSPHATASE 2C40 |
| Gene Name Synonym | protein phosphatase 2C40, protein phosphatase 2C 40, protein phosphatase 65 |
| Protein Name | PROTEIN PHOSPHATASE 2C40 |
| Allele | |
| Chromosome No. | 4 |
| Explanation | Q7XTC7. GO:1901001: negative regulation of response to salt stress. GO:1900091: regulation of raffinose biosynthetic process. |
| Trait Class |
Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK241313
|
| MSU ID |
LOC_Os04g37660.1
LOC_Os04g37660.2 |
| RAP ID |
Os04g0449400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Liu Q., Ding J., Huang W., Yu H., Wu S., Li W., Mao X., Chen W., Xing J., Li C., Yan S.
Rice (N Y) 2022 15(1) 34 OsPP65 Negatively Regulates Osmotic and Salt Stress Responses Through Regulating Phytohormone and Raffinose Family Oligosaccharide Metabolic Pathways in Rice.
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Singh A., Giri J., Kapoor S., Akhilesh K Tyagi, Girdhar K Pandey
BMC Genomics 2010 11 435 Protein phosphatase complement in rice: genome-wide identification and transcriptional analysis under abiotic stress conditions and reproductive development.
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Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jakab S., Zheng C., Zhong Y.
BMC Genomics 2008 9 550 Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
water homeostasis( GO:0030104 )
regulation of abscisic acid biosynthetic process( GO:0010115 ) regulation of jasmonic acid biosynthetic process( GO:0080141 ) jasmonic acid mediated signaling pathway( GO:0009867 ) abscisic acid mediated signaling( GO:0009738 ) response to jasmonic acid stimulus( GO:0009753 ) response to abscisic acid stimulus( GO:0009737 ) response to cold( GO:0009409 ) response to hydrogen peroxide( GO:0042542 ) cytoplasm( GO:0005737 ) nucleus( GO:0005634 ) regulation of raffinose metabolic process( GO:0080091 ) raffinose family oligosaccharide biosynthetic process( GO:0010325 ) response to salt stress( GO:0009651 ) regulation of response to osmotic stress( GO:0047484 ) response to osmotic stress( GO:0006970 ) phosphoprotein phosphatase activity( GO:0004721 ) metal ion binding( GO:0046872 ) |
| Trait Ontology |
osmotic response sensitivity( TO:0000095 )
salt tolerance( TO:0006001 ) raffinose content( TO:0006004 ) cold tolerance( TO:0000303 ) abscisic acid sensitivity( TO:0000615 ) jasmonic acid sensitivity( TO:0000172 ) abscisic acid content( TO:0002667 ) jasmonic acid content( TO:0002668 ) hexose content( TO:0000307 ) stomatal frequency( TO:0000566 ) |
| Plant Ontology |
leaf( PO:0025034 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 28, 2022 | |
