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Basic Information
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CGSNL Gene Symbol
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PYL/RCAR9
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Gene Symbol Synonym
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OsPYL/RCAR9, PYL9, OsPYL9, OsPYL2, PYL2
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CGSNL Gene Name
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PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 9
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Gene Name Synonym
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pyrabactin resistance-like 9, PYR1-like 2, pyrabactin resistance 1-like 2
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Protein Name
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PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 9
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Allele
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pyl2
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Chromosome No.
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6
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Explanation
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cytosolic ABA receptor. Q5Z8S0. PDB ID:4OIC. OsPYL2 in He et al. 2014, Miao et al. 2018, Miao et al. 2020, Yuan et al. 2021, Song et al. 2022, Miao et al. 2024, Qin et al. 2024. GO:0038023: signaling receptor activity. GO:1905183: negative regulation of protein serine/threonine phosphatase activity. GO:0080163: regulation of protein serine/threonine phosphatase activity. GO:1904276: regulation of wax biosynthetic process. TO:0020109: vascular bundle development trait. GO:0090333: regulation of stomatal closure. TO:0020095: stomatal process related trait. GO:2000377: regulation of reactive oxygen species metabolic process. GO:0090351: seedling development. GO:1900140 regulation of seedling development. TO:0000949: seedling growth and development trait.
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Trait Class
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Vegetative organ - Leaf
Coloration - Chlorophyll
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Character as QTL - Germination
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK107448
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MSU ID
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LOC_Os06g36670.1
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RAP ID
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Os06g0562200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
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RAP-DB
(
IRGSP 1.0
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Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Guo H., Gao S., Li H., Yang J., Li J., Gu Y., Lou Q., Su R., Ye W., Zou A., Wang Y., Sun X., Zhang Z., Zhang H., Zeng Y., Yuan P., Peng Y., Li Z., Li J.
Nat Commun 2025 16(1) 1032
Natural variation of CTB5 confers cold adaptation in plateau japonica rice.
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Singh J., Sandhu N., Kumar A., Raigar O.P., Bains S., Augustine G., Gupta M., Kharche E., Kalia A., Bains N.S., Kumar A.
Rice (N Y) 2025 18(1) 5
Deciphering Regulatory Networks Governing Seedling Emergence in Deep-Sown Direct-Seeded Rice Cultivation.
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Bataller S., Davis J.A., Gu L., Baca S., Chen G., Majid A., Villacastin A.J., Barth D., Han M.V., Rushton P.J., Shen Q.J.
BMC Plant Biol. 2024 24(1) 1090
Disruption of the OsWRKY71 transcription factor gene results in early rice seed germination under normal and cold stress conditions.
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Qin C., Fan X., Fang Q., Yu H., Ni L., Jiang M.
New Phytol. 2024 244(4) 1345-1361
Abscisic acid-induced H2O2 production positively regulates the activity of SAPK8/9/10 through oxidation of the type one protein phosphatase OsPP47.
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Miao J., Bu L., Tan W., Wang P., Li X., Li X., Chen C., Zhang K., Shen W., Gong Z., Bahetibieke G., Ren L., Liang G., Zhou Y.
Rice (N Y) 2024 17(1) 65
OsPP2C49, a Negative Regulatory Factor in the Abscisic Acid Signaling Pathway, Positively Regulates grain yield in Rice.
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Li J., Chen L., Ding X., Fan W., Liu J.
Int J Mol Sci 2022 23(11)
Transcriptome Analysis Reveals Crosstalk between the Abscisic Acid and Jasmonic Acid Signaling Pathways in Rice-Mediated Defense against <i>Nilaparvata lugens</i>.
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Song G., Son S., Lee K.S., Park Y.J., Suh E.J., Lee S.I., Park S.R.
Plants (Basel) 2022 11(15)
OsWRKY114 Negatively Regulates drought tolerance by Restricting Stomatal Closure in Rice.
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Yuan J., Meng J., Liang X., Yang E., Yang X., Chen W.F.
Front Plant Sci 2021 12 646910
Biochar's Leacheates Affect the Abscisic Acid Pathway in Rice Seedlings Under Low Temperature.
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Miao J., Li X., Li X., Tan W., You A., Wu S., Tao Y., Chen C., Wang J., Zhang D., Gong Z., Yi C., Yang Z., Gu M., Liang G., Zhou Y.
New Phytol. 2020 227(5) 1417-1433
OsPP2C09, a negative regulatory factor in abscisic acid signalling, plays an essential role in balancing plant growth and drought tolerance in rice.
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Usman B., Nawaz G., Zhao N., Liao S., Liu Y., Li R.
Int J Mol Sci 2020 21(21)
Precise Editing of the <i>OsPYL9</i> Gene by RNA-Guided Cas9 Nuclease Confers Enhanced drought tolerance and grain yield in Rice (<i>Oryza sativa</i> L.) by Regulating Circadian Rhythm and Abiotic Stress Responsive Proteins.
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Han S., Lee Y., Park E.J., Min M.K., Lee Y., Kim T.H., Kim B.G., Lee S.
Plant Mol. Biol. 2019 100(3) 319-333
Structural determinants for pyrabactin recognition in ABA receptors in Oryza sativa.
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Miao C., Xiao L., Hua K., Zou C., Zhao Y., Bressan R.A., Zhu J.K.
Proc. Natl. Acad. Sci. U.S.A. 2018 115(23) 6058-6063
Mutations in a subfamily of abscisic acid receptor genes promote rice growth and productivity.
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Han S., Min M.K., Lee S.Y., Lim C.W., Bhatnagar N., Lee Y., Shin D., Chung K.Y., Lee S.C., Kim B.G., Lee S.
Mol Plant 2017
Modulation of ABA signaling by altering VxGPhiL motif of PP2Cs in Oryza sativa.
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Tian X., Wang Z., Li X., Lv T., Liu H., Wang L., Niu H., Bu Q.
Rice (N Y) 2015 8(1) 28
Characterization and Functional Analysis of Pyrabactin Resistance-Like Abscisic Acid Receptor Family in Rice.
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He Y., Hao Q., Li W., Yan C., Yan N., Yin P.
PLoS ONE 2014 9(4) e95246
Identification and characterization of ABA receptors in Oryza sativa.
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Kim H., Hwang H., Hong J.W., Lee Y.N., Ahn I.P., Yoon I.S., Yoo S.D., Lee S., Lee S.C., Kim B.G.
J. Exp. Bot. 2012 63(2) 1013-24
A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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nucleus( GO:0005634 )
cytosol( GO:0005829 )
response to cold( GO:0009409 )
response to water deprivation( GO:0009414 )
response to abscisic acid stimulus( GO:0009737 )
abscisic acid mediated signaling( GO:0009738 )
cytoplasm( GO:0005737 )
seed germination( GO:0009845 )
phosphoprotein phosphatase inhibitor activity( GO:0004864 )
protein homodimerization activity( GO:0042803 )
wax biosynthetic process( GO:0010025 )
regulation of stomatal movement( GO:0010119 )
regulation of circadian rhythm( GO:0042752 )
abscisic acid binding( GO:0010427 )
response to jasmonic acid stimulus( GO:0009753 )
defense response to insect( GO:0002213 )
water homeostasis( GO:0030104 )
stomatal movement( GO:0010118 )
regulation of abscisic acid mediated signaling( GO:0009787 )
regulation of seed germination( GO:0010029 )
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Trait Ontology
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abscisic acid sensitivity( TO:0000615 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
grain yield( TO:0000396 )
abscisic acid content( TO:0002667 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
carotenoid content( TO:0000496 )
stomatal conductance( TO:0000522 )
leaf gloss( TO:0000709 )
vascular tissue related trait( TO:0000470 )
brown planthopper resistance( TO:0000424 )
jasmonic acid sensitivity( TO:0000172 )
hydrogen peroxide content( TO:0000605 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Mar 11, 2026
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Update info.