Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | VALRS1 |
| Gene Symbol Synonym | OsValRS1, ValRS1 |
| CGSNL Gene Name | VAL-TRNA SYNTHETASE 1 |
| Gene Name Synonym | Valine:tRNA ligase, Val-tRNA Synthetase 1 |
| Protein Name | VAL-TRNA SYNTHETASE 1 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | D22982. GO:0002161: aminoacyl-tRNA editing activity. LOC_Os03g48850. |
| Trait Class |
Biochemical character
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK121157
|
| MSU ID |
LOC_Os03g48850.1
LOC_Os03g48850.2 |
| RAP ID |
Os03g0694900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Wang Y., Wang C., Zheng M., Lyu J., Xu Y., Li X., Niu M., Long W., Wang D., Wang H., Terzaghi W., Wang Y., Wan J.
Plant Physiol. 2016 170(4) 2110-23 WHITE PANICLE1, a Val-tRNA synthetase Regulating Chloroplast Ribosome Biogenesis in Rice, Is Essential for Early Chloroplast Development.
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Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994 6(4) 615-624 Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
valine-tRNA ligase activity( GO:0004832 )
ATP binding( GO:0005524 ) mitochondrion( GO:0005739 ) cytosol( GO:0005829 ) valyl-tRNA aminoacylation( GO:0006438 ) chloroplast( GO:0009507 ) embryonic development ending in seed dormancy( GO:0009793 ) |
| Trait Ontology | - |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jun 8, 2016 | |
