Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol UBL40-1
Gene Symbol Synonym UbL40-1, OsUbL40-1
CGSNL Gene Name UBIQUITIN FUSION RIBOSOMAL PROTEIN L40-1
Gene Name Synonym Ubiquitin 81-aa extension protein 1, ubiquitin fusion ribosomal protein L40-1
Protein Name UBIQUITIN FUSION RIBOSOMAL PROTEIN L40-1
Allele
Chromosome No. 9
Explanation D15946.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. CT837725
MSU ID LOC_Os09g27930.1
RAP ID Os09g0452700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wen J., Wang L., Wang J., Zeng Y., Xu Y., Li S.
Theor. Appl. Genet. 2019  132(6)  1721-1732
The transcription factor OsbHLH138 regulates thermosensitive genic male sterility in rice via activation of tms5.
Jin J., Gui S., Li Q., Wang Y., Zhang H., Zhu Z., Chen H., Sun Y., Zou Y., Huang X., Ding Y.
J Integr Plant Biol 2019   
The transcription factor GATA10 regulates fertility conversion of a two-line hybrid tms5 mutant rice via the modulation of UbL40 expression.
Zhou H., Zhou M., Yang Y., Li J., Zhu L., Jiang D., Dong J., Liu Q., Gu L., Zhou L., Feng M., Qin P., Hu X., Song C., Shi J., Song X., Ni E., Wu X., Deng Q., Liu Z., Chen M., Liu Y.G., Cao X., Zhuang C.
Nat Commun 2014  5  4884
RNase Z(S1) processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
DB Reference
Gramene ID -
Ontologies
Gene Ontology structural constituent of ribosome( GO:0003735 )
translation( GO:0006412 )
cytosolic large ribosomal subunit( GO:0022625 )
nucleolus( GO:0005730 )
anther development( GO:0048653 )
response to heat( GO:0009408 )
Trait Ontology male sterility( TO:0000437 )
heat tolerance( TO:0000259 )
Plant Ontology anther development stage( PO:0001004 )
Related Strains
-
Phenotype images
-
Last updated
Mar 23, 2020

/rice/oryzabase