Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CPD2B
Gene Symbol Synonym OsSCP10, SCP10
CGSNL Gene Name TYPE IIB CARBOXYPEPTIDASE
Gene Name Synonym Serine carboxypeptidase II B chain, Serine carboxypeptidase 10
Protein Name TYPE IIB CARBOXYPEPTIDASE
Allele
Chromosome No. 2
Explanation D23600. LOC_Os02g55130. OsSCP10 in Xu et al. 2015. SCPL (serine carboxypeptidase-like) protein. Serine Carboxypeptidase Family (Peptidase_S10; PF00450). http://rice.plantbiology.msu.edu/ca/gene_fams/27_76.shtml
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK111818
MSU ID LOC_Os02g55130.1
LOC_Os02g55130.2
LOC_Os02g55130.3
LOC_Os02g55130.4
LOC_Os02g55130.5
RAP ID Os02g0794500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Xu C., Liu Y., Li Y., Xu X., Xu C., Li X., Xiao J., Zhang Q.
J. Exp. Bot. 2015  66(9)  2611-23
Differential expression of GS5 regulates grain size.in rice.
Ouyang S., Zhu W., Hamilton J., Lin H., Campbell M., Childs K., Françoise Thibaud-Nissen, Renae L Malek, Lee Y., Zheng L., Orvis J., Haas B., Wortman J., C Robin Buell
Nucleic Acids Res. 2007  35(Database issue)  D883-7
The TIGR Rice Genome Annotation Resource: improvements and new features.
Lokesh P Tripathi, R Sowdhamini
BMC Genomics 2006  7  200
Cross genome comparisons of serine proteases in Arabidopsis and rice.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
DB Reference
Gramene ID -
Ontologies
Gene Ontology serine-type carboxypeptidase activity( GO:0004185 )
brassinosteroid mediated signaling( GO:0009742 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 27, 2015

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