Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol AFB4
Gene Symbol Synonym Os_F0767, OsTIR1, TIR1, OsAFB4, OsFBL71, FBL71
CGSNL Gene Name AUXIN SIGNALING F-BOX 4
Gene Name Synonym AUXIN SIGNALING F-BOX 4, Auxin F-box protein 4, F-box-type E3 ubiquitin ligase L71
Protein Name AUXIN SIGNALING F-BOX 4
Allele Osafb4, afb4
Chromosome No. 2
Explanation F-box protein.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK100506
MSU ID LOC_Os02g52230.1
RAP ID Os02g0759700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Shuen-Fang Lo, Ming-Lung Cheng, Yue-Ie Caroline Hsing, Yi-Shih Chen, Kuo-Wei Lee, Ya-Fang Hong, Hsiao Y., An-Shan Hsiao, Pei-Jing Chen, Lai-In Wong, Nan-Chen Chen, Reuzeau C., Tuan-Hua David Ho, Su-May Yu
Plant Biotechnol. J. 2020   
Rice Big Grain 1 promotes cell division to enhance organ development, stress tolerance and grain yield.
Guo F., Huang Y., Qi P., Lian G., Hu X., Han N., Wang J., Zhu M., Qian Q., Bian H.
New Phytol. 2020   
Functional analysis of auxin receptor OsTIR1/OsAFB family members in rice grain yield, tillering, plant height, root system, germination, and auxinic herbicide resistance.
Zhao H., Ma T., Wang X., Deng Y., Ma H., Zhang R., Zhao J.
Plant Cell Environ. 2014   
OsAUX1 controls lateral root initiation in rice (Oryza sativa L.).
Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011  6(1)  e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(3)  835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
DB Reference
Gramene ID -
Ontologies
Gene Ontology auxin mediated signaling pathway( GO:0009734 )
response to herbicide( GO:0009635 )
Trait Ontology herbicide sensitivity( TO:0000058 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 29, 2025

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