Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol BRT1
Gene Symbol Synonym OsFbox189, Os_F0133, OsFBX125, FBX125, OsBRT1
CGSNL Gene Name BROADER TILLER ANGLE 1
Gene Name Synonym F-box protein 189, F-box-type E3 ubiquitin ligase X125
Protein Name F-BOX PROTEIN 189
Allele brt1-2, brt1-3, brt1-5, brt1-7, brt1-c, brt1-e
Chromosome No. 4
Explanation Os_F0133 in Hua et al. 2011. TO:0000783: inflorescence axis size.
Trait Class Vegetative organ - Culm
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK069629
MSU ID LOC_Os04g13150.1
RAP ID Os04g0208400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Mineri L., Cerise M., Giaume F., Vicentini G., Martignago D., Chiara M., Galbiati F., Spada A., Horner D., Fornara F., Brambilla V.
Plant J. 2023   
Rice florigens control a common set of genes at the shoot apical meristem including the F-BOX BROADER tiller angle 1 that regulates tiller angle and spikelet development.
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011  6(1)  e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(3)  835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
Yang X., Udaya C Kalluri, Jawdy S., Lee E Gunter, Yin T., Timothy J Tschaplinski, David J Weston, Ranjan P., Gerald A Tuskan
Plant Physiol. 2008  148(3)  1189-200
The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants.
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007  143(4)  1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology photoperiodism( GO:0009648 )
inflorescence development( GO:0010229 )
Trait Ontology tiller angle( TO:0000567 )
inflorescence development trait( TO:0000621 )
photoperiod sensitivity( TO:0000229 )
sterile lemma length( TO:0000240 )
Plant Ontology inflorescence development stage( PO:0001083 )
reproductive shoot system( PO:0025082 )
inflorescence( PO:0009049 )
plant ovary( PO:0009072 )
shoot apical meristem( PO:0020148 )
flower meristem transition stage( PO:0025588 )
Related Strains
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Phenotype images
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Last updated
Nov 3, 2023

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