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Basic Information
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CGSNL Gene Symbol
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2ODD2
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Gene Symbol Synonym
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FLS, 2-ODD2, Os2-ODD2, Os2ODD2, OsF3H, F3H, F3H2, OsF3H2, OsF3H03g, F3H03g, OsSAH1, SAH1, OsF3H1, F3H1, OsS5H1, S5H1, OsDMR6-1, DMR6-1
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CGSNL Gene Name
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2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 2
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Gene Name Synonym
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flavonol synthase, 2-oxoglutarate-dependent dioxygenase 2, flavanone 3-hydroxylase, SA hydroxylase 1, salicylic acid hydroxylase 1, salicylic acid 5-hydroxylase 1, Downy Mildew Resistant 6-1
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Protein Name
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2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 2
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Allele
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oss5h1
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Chromosome No.
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3
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Explanation
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F3H2 in Liu et al. 2020. OsF3H1 in Wang et al. 2022. GO:0140426: pathogen-associated molecular pattern receptor signaling pathway. TO:0000975: grain width.
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Trait Class
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Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Tolerance and resistance - Insect resistance
Seed - Morphological traits - Grain shape
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Coloration - Anthocyanin
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK104414
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MSU ID
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LOC_Os03g03034.1
LOC_Os03g03034.2
LOC_Os03g03034.3
LOC_Os03g03034.4
LOC_Os03g03034.5
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RAP ID
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Os03g0122300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Liu X., Xie Z., Xin J., Yuan S., Liu S., Sun Y., Zhang Y., Jin C.
Plants (Basel) 2024 13(4)
OsbZIP18 Is a Positive Regulator of Phenylpropanoid and Flavonoid Biosynthesis under UV-B Radiation in Rice.
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Chen S., Tao Z., Shen Y., Yang R., Yan S., Chen Z., Sun B., Yang X.
Insect Science 2024
Magnaporthe oryzae infection triggers rice resistance to brown planthopper through the influence of jasmonic acid on the flavonoid biosynthesis pathway.
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Hou J., Xiao H., Yao P., Ma X., Shi Q., Yang J., Hou H., Li L.
Plant Biotechnol. J. 2024
Unveiling the mechanism of broad-spectrum blast resistance in rice: The collaborative role of transcription factor OsGRAS30 and histone deacetylase OsHDAC1.
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Liu X., Yu Y., Yao W., Yin Z., Wang Y., Huang Z., Zhou J.Q., Liu J., Lu X., Wang F., Zhang G., Chen G., Xiao Y., Deng H., Tang W.
Plant Biotechnol. J. 2023
CRISPR/Cas9-mediated simultaneous mutation of three salicylic acid 5-hydroxylase (OsS5H) genes confers broad-spectrum disease resistance in rice.
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Liang B., Wang H., Yang C., Wang L., Qi L., Guo Z., Chen X.
Int J Mol Sci 2022 23(3)
Salicylic Acid Is Required for Broad-Spectrum disease resistance in Rice.
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Wang J., Zhang C., Li Y.
Genes (Basel) 2022 13(3)
Genome-Wide Identification and Expression Profiles of 13 Key Structural Gene Families Involved in the Biosynthesis of Rice Flavonoid Scaffolds.
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Wu T., Zhang H., Bi Y., Yu Y., Liu H., Yang H., Yuan B., Ding X., Chu Z.
Int J Mol Sci 2021 22(24)
Tal2c Activates the Expression of <i>OsF3H04g</i> to Promote Infection as a Redundant TALE of Tal2b in <i>Xanthomonas oryzae</i> pv. <i>oryzicola</i>.
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Qiao W., Wang Y., Xu R., Yang Z., Sun Y., Su L., Zhang L., Wang J., Huang J., Zheng X., Liu S., Tian Y., Chen L., Liu X., Lan J., Yang Q.
Theor. Appl. Genet. 2021 134(5) 1531-1543
A functional chromogen gene C from wild rice is involved in a different anthocyanin biosynthesis pathway in indica and japonica.
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Yang Z., Li N., Kitano T., Li P., Spindel J.E., Wang L., Bai G., Xiao Y., McCouch S.R., Ishihara A., Zhang J., Yang X., Chen Z., Wei J., Ge H., Jander G., Yan J.
Plant J. 2021 106(5) 1401-1413
Genetic mapping identifies a rice naringenin O-glucosyltransferase that influences insect resistance.
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Xu R., Pan R., Zhang Y., Feng Y., Nath U.K., Gan Y., Shi C., Akhter D.
Int J Mol Sci 2021 22(18)
RNA-Seq-Based Profiling of <i>pl</i> Mutant Reveals Transcriptional Regulation of Anthocyanin Biosynthesis in Rice (<i>Oryza sativa</i> L.).
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Liu X.L., Wang L., Wang X.W., Yan Y., Yang X.L., Xie M.Y., Hu Z., Shen X., Ai H., Lin H.H., Xu G.H., Yang J., Sun S.B.
Plant J. 2020 102(1) 53-67
Mutation of the chloroplast-localized phosphate transporter OsPHT2;1 reduces flavonoid accumulation and UV tolerance in rice.
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Dai Z., Tan J., Zhou C., Yang X., Yang F., Zhang S., Sun S., Miao X., Shi Z.
Plant Biotechnol. J. 2019
The OsmiR396-OsGRF8-OsF3H-flavonoid pathway mediates resistance to the brown planthopper in rice (Oryza sativa).
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Byeon Y., Back K.
J. Pineal Res. 2015 58(3) 343-51
Molecular cloning of melatonin 2-hydroxylase responsible for 2-hydroxymelatonin production in rice (Oryza sativa).
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Park H.L., Lee S.W., Jung K.H., Hahn T.R., Cho M.H.
Phytochemistry 2013 96 57-71
Transcriptomic analysis of UV-treated rice leaves reveals UV-induced phytoalexin biosynthetic pathways and their regulatory networks in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to UV( GO:0009411 )
response to bacterium( GO:0009617 )
response to fungus( GO:0009620 )
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors( GO:0016706 )
defense response to insect( GO:0002213 )
dioxygenase activity( GO:0051213 )
metal ion binding( GO:0046872 )
anthocyanin biosynthetic process( GO:0009718 )
response to jasmonic acid stimulus( GO:0009753 )
response to salicylic acid stimulus( GO:0009751 )
salicylic acid catabolic process( GO:0046244 )
regulation of salicylic acid biosynthetic process( GO:0080142 )
salicylic acid mediated signaling pathway( GO:0009863 )
defense response to bacterium( GO:0042742 )
flavone biosynthetic process( GO:0051553 )
response to UV-B( GO:0010224 )
defense response to fungus( GO:0050832 )
respiratory burst during defense response( GO:0002679 )
pattern recognition receptor signaling pathway( GO:0002221 )
response to molecule of bacterial origin( GO:0002237 )
cytoplasm( GO:0005737 )
salicylic acid metabolic process( GO:0009696 )
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Trait Ontology
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brown planthopper resistance( TO:0000424 )
flavonoid content( TO:0000290 )
UV light sensitivity( TO:0000160 )
leaf color( TO:0000326 )
bacterial leaf streak disease resistance( TO:0000203 )
bacterial blight disease resistance( TO:0000175 )
jasmonic acid sensitivity( TO:0000172 )
UV-B light sensitivity( TO:0000601 )
blast disease( TO:0000074 )
plant height( TO:0000207 )
grain length( TO:0000734 )
grain width( TO:0000402 )
grain thickness( TO:0000399 )
1000-seed weight( TO:0000382 )
seed set percent( TO:0000455 )
filled grain number( TO:0000447 )
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Plant Ontology
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shoot system( PO:0009006 )
leaf( PO:0025034 )
leaf sheath( PO:0020104 )
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Related Strains
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Phenotype images
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Last updated
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Mar 3, 2026
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Update info.