Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RPT5B
Gene Symbol Synonym OsRpt5b, Rpt5b
CGSNL Gene Name 19S REGULATORY PARTICLE ATPASE SUBUNIT 5B
Gene Name Synonym 19S regulatory particle ATPase subunit 5b, RP triple A-ATPase 5b
Protein Name 19S REGULATORY PARTICLE ATPASE SUBUNIT 5B
Allele
Chromosome No. 6
Explanation a ubiquitin-proteasome system (UPS) gene. a 19S regulatory particle subunit from the rice 26S proteasome. C71991. AB071016.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK065612
MSU ID LOC_Os06g07630.1
RAP ID Os06g0173100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang X., Rerksiri W., Liu A., Zhou X., Xiong H., Xiang J., Chen X., Xiong X.
Gene 2013  530(2)  185-92
Transcriptome profile reveals heat response mechanism at molecular and metabolic levels in rice flag leaf.
Shibahara T., Kawasaki H., Hirano H.
Arch. Biochem. Biophys. 2004  421(1)  34-41
Mass spectrometric analysis of expression of ATPase subunits encoded by duplicated genes in the 19S regulatory particle of rice 26S proteasome.
Shibahara T., Kawasaki H., Hirano H.
Eur. J. Biochem. 2002  269(5)  1474-83
Identification of the 19S regulatory particle subunits from the rice 26S proteasome.
DB Reference
Gramene ID GR:0061410
Ontologies
Gene Ontology proteasome complex( GO:0000502 )
ATP binding( GO:0005524 )
cytoplasm( GO:0005737 )
response to heat( GO:0009408 )
nucleoside-triphosphatase activity( GO:0017111 )
protein catabolic process( GO:0030163 )
Trait Ontology temperature response trait( TO:0000432 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Apr 22, 2016

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