Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym R2R3-MYB, MYB48/59, OsMYB48/59, Os2R_MYB98, 2R_MYB98, MYB2-116, OsMYB2-116
CGSNL Gene Name _
Gene Name Synonym R2R3-MYB Transcription Factor 98, R2R3-MYB transcription factor 2-116
Protein Name
Allele
Chromosome No. 12
Explanation AK107214. CA767403. Q4JL76. GO:1900055: regulation of leaf senescence.
Trait Class Other
Coloration
Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. CT833282
MSU ID LOC_Os12g37970.1
LOC_Os12g37970.2
LOC_Os12g37970.3
RAP ID Os12g0567300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang H.C., Gong Y.H., Tao T., Lu S., Zhou W.Y., Xia H., Zhang X.Y., Yang Q.Q., Zhang M.Q., Hong L.M., Guo Q.Q., Ren X.Z., Yang Z.D., Cai X.L., Ren D.Y., Gao J.P., Jin S.K., Leng Y.J.
BMC Genomics 2024  25(1)  797
Genome-wide identification of R2R3-MYB transcription factor subfamily genes involved in salt stress in rice (Oryza sativa L.).
Kang L., Teng Y., Cen Q., Fang Y., Tian Q., Zhang X., Wang H., Zhang X., Xue D.
Plants (Basel) 2022  11(15) 
Genome-Wide Identification of R2R3-MYB Transcription Factor and Expression Analysis under Abiotic Stress in Rice.
Xue J., Lu D., Wang S., Lu Z., Liu W., Wang X., Fang Z., He X.
Sci Rep 2021  11(1)  14083
Integrated transcriptomic and metabolomic analysis provides insight into the regulation of leaf senescence in rice.
Qiao W., Wang Y., Xu R., Yang Z., Sun Y., Su L., Zhang L., Wang J., Huang J., Zheng X., Liu S., Tian Y., Chen L., Liu X., Lan J., Yang Q.
Theor. Appl. Genet. 2021  134(5)  1531-1543
A functional chromogen gene C from wild rice is involved in a different anthocyanin biosynthesis pathway in indica and japonica.
Mohanty B.
Front Genet 2021  12  639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
Madana M R Ambavaram, Krishnan A., Kurniawan R Trijatmiko, Pereira A.
Plant Physiol. 2011  155(2)  916-31
Coordinated activation of cellulose and repression of lignin biosynthesis pathways in rice.
Jia L., Michael T Clegg, Jiang T.
Plant Physiol. 2004  134(2)  575-85
Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified from rice subspecies indica and japonica genomes.
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
chromatin binding( GO:0003682 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to deep water( GO:0030912 )
leaf senescence( GO:0010150 )
positive regulation of flavonoid biosynthetic process( GO:0009963 )
response to cadmium ion( GO:0046686 )
response to water deprivation( GO:0009414 )
Trait Ontology submergence tolerance( TO:0000524 )
leaf senescence( TO:0000249 )
drought tolerance( TO:0000276 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 14, 2025

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