Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | GL1A |
| Gene Symbol Synonym | R2R3-MYB, OsGL1A, DLN218, OsDLN218, OsMYB102, MYB102, Os2R_MYB81, 2R_MYB81 , MYB2-97, OsMYB2-97, OsMYB7, MYB7 |
| CGSNL Gene Name | GLABRA 1A |
| Gene Name Synonym | GLABRA1A, DLN repressor 218, DLN motif protein 218, MYB transcription factor 102, R2R3-MYB Transcription Factor 81, R2R3-MYB transcription factor 2-97 |
| Protein Name | DLN REPRESSOR 218 |
| Allele | osmyb7, osmyb7-1 |
| Chromosome No. | 8 |
| Explanation | AY459336, CB653197. a homologue of Arabidopsis transcription factor GL1. OsMYB102 in Muthuramalingam et al. 2022. OsMYB7 in Kim et al. 2023. GO:1990641: response to iron ion starvation. GO:1901141: regulation of lignin biosynthetic process. TO:0000993: cellulose content. TO:0020106: Indole-3-acetic acid content. GO:2001008: positive regulation of cellulose biosynthetic process. GO:2000652: regulation of secondary cell wall biogenesis. GO:0090355: positive regulation of auxin metabolic process. |
| Trait Class |
Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os08g43550.1
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| RAP ID |
Os08g0549000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Zhang H.C., Gong Y.H., Tao T., Lu S., Zhou W.Y., Xia H., Zhang X.Y., Yang Q.Q., Zhang M.Q., Hong L.M., Guo Q.Q., Ren X.Z., Yang Z.D., Cai X.L., Ren D.Y., Gao J.P., Jin S.K., Leng Y.J.
BMC Genomics 2024 25(1) 797 Genome-wide identification of R2R3-MYB transcription factor subfamily genes involved in salt stress in rice (Oryza sativa L.).
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Kim S.H., Yoon J., Kim H., Lee S.J., Kim T., Kang K., Paek N.C.
Front Plant Sci 2023 14 1167202 OsMYB7 determines leaf angle at the late developmental stage of lamina joints in rice.
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Muthuramalingam P., Jeyasri R., Selvaraj A., Shin H., Chen J.T., Satish L., Wu Q.S., Ramesh M.
Front Genet 2022 13 946834 Global Integrated Genomic and Transcriptomic Analyses of MYB Transcription Factor Superfamily in C3 Model Plant <i>Oryza sativa</i> (L.) Unravel Potential Candidates Involved in Abiotic Stress Signaling.
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Kang L., Teng Y., Cen Q., Fang Y., Tian Q., Zhang X., Wang H., Zhang X., Xue D.
Plants (Basel) 2022 11(15) Genome-Wide Identification of R2R3-MYB Transcription Factor and Expression Analysis under Abiotic Stress in Rice.
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Zheng K., Wang X., Wang Y., Wang S.
BMC Plant Biol. 2021 21(1) 234 Conserved and non-conserved functions of the rice homologs of the Arabidopsis trichome initiation-regulating MBW complex proteins.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7) Analysis of Rice Proteins with DLN repressor Motif/S.
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Zheng K., Tian H., Hu Q., Guo H., Yang L., Cai L., Wang X., Liu B., Wang S.
Sci Rep 2016 6 19254 Ectopic expression of R3 MYB transcription factor gene OsTCL1 in Arabidopsis, but not rice, affects trichome and root hair formation.
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Jia L., Michael T Clegg, Jiang T.
Plant Physiol. 2004 134(2) 575-85 Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified from rice subspecies indica and japonica genomes.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
DNA binding( GO:0003677 )
chromatin binding( GO:0003682 ) response to cadmium ion( GO:0046686 ) response to water deprivation( GO:0009414 ) response to salt stress( GO:0009651 ) response to hypoxia( GO:0001666 ) response to heat( GO:0009408 ) response to abscisic acid stimulus( GO:0009737 ) response to jasmonic acid stimulus( GO:0009753 ) mitochondrion( GO:0005739 ) nucleus( GO:0005634 ) negative regulation of transcription, DNA-dependent( GO:0045892 ) lignin biosynthetic process( GO:0009809 ) cell wall thickening( GO:0052386 ) positive regulation of cell growth( GO:0030307 ) positive regulation of unidimensional cell growth( GO:0051512 ) cellulose biosynthetic process( GO:0030244 ) secondary cell wall biogenesis( GO:0009834 ) response to auxin stimulus( GO:0009733 ) auxin mediated signaling pathway( GO:0009734 ) regulation of auxin biosynthetic process( GO:0010600 ) auxin metabolic process( GO:0009850 ) |
| Trait Ontology |
jasmonic acid sensitivity( TO:0000172 )
abscisic acid sensitivity( TO:0000615 ) heat tolerance( TO:0000259 ) salt tolerance( TO:0006001 ) drought tolerance( TO:0000276 ) iron sensitivity( TO:0000224 ) leaf angle( TO:0000206 ) leaf lamina joint bending( TO:0002688 ) lignin content( TO:0000731 ) lignin biosynthesis trait( TO:0000733 ) auxin content( TO:0002672 ) auxin sensitivity( TO:0000163 ) |
| Plant Ontology |
endosperm( PO:0009089 )
plant embryo( PO:0009009 ) lemma( PO:0009037 ) stem( PO:0009047 ) root( PO:0009005 ) leaf sheath( PO:0020104 ) leaf( PO:0025034 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Feb 18, 2025 | |
