Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol HMGB710
Gene Symbol Synonym OsHMGB710, OsNFD101, NFD101
CGSNL Gene Name HIGH MOBILITY GROUP PROTEIN B710
Gene Name Synonym HMG protein, high-mobility group protein, nucleasome/chromatin assembly factor D protein of HMG protein family, nucleasome/chromatin assembly factor D, nucleosome/chromatin assembly factor D protein 101
Protein Name HIGH MOBILITY GROUP PROTEIN B710
Allele
Chromosome No. 9
Explanation D47590. D22603. D29711. he most promising candidate gene of qCIR9.1 (QTL associated with anther culturability). PO:0030123: panicle inflorescence.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK066658
MSU ID LOC_Os09g37910.1
RAP ID Os09g0551600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Deushi R., Toda E., Koshimizu S., Yano K., Okamoto T.
Plants (Basel) 2021  10(2) 
Effect of Paternal Genome Excess on the Developmental and Gene Expression Profiles of Polyspermic Zygotes in Rice.
Huang C., Zhang J., Zhou D., Huang Y., Su L., Yang G., Luo W., Chen Z., Wang H., Guo T.
Theor. Appl. Genet. 2021  134(7)  2097-2111
Identification and candidate gene screening of qCIR9.1, a novel QTL associated with anther culturability in rice (Oryza sativa L.).
Xu K., Chen S., Li T., Yu S., Zhao H., Liu H., Luo L.
Front Plant Sci 2021  12  711271
Overexpression of OsHMGB707, a High Mobility Group Protein, Enhances Rice drought tolerance by Promoting Stress-Related Gene Expression.
Yamaguchi,T., Nakayama,K., Hayashi,T., Yazaki,J., Kishimoto,N., Kikuchi,S. and Koike,S.
Biosci. Biotechnol. Biochem. 2004  68(6)  1315-1323
cDNA Microarray Analysis of Rice Anther Genes under Chilling Stress at the Microsporogenesis Stage Revealed Two Genes with DNA Transposon Castaway in the 5'-Flanking Region.
Hihara,Y., Shoda,K., Liu,Q., Hara,C., Umeda,M., Toriyama,K. and Uchiyama,H.
Plant Biotechnol. 1997  14(1)  71-75
Expressed sequence tags in developing anthers of rice (Oryza sativa L.)
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
DNA binding( GO:0003677 )
fertilization( GO:0009566 )
Trait Ontology temperature response trait( TO:0000432 )
Plant Ontology inflorescence( PO:0009049 )
plant callus( PO:0005052 )
plant embryo( PO:0009009 )
carpel( PO:0009030 )
anther( PO:0009066 )
Related Strains
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Phenotype images
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Last updated
Feb 22, 2023


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