Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NAC50
Gene Symbol Synonym ONAC050, ONAC50, OsSGL, SGL, OsNAC02, NAC02
CGSNL Gene Name NAC DOMAIN-CONTAINING PROTEIN 50
Gene Name Synonym NAC domain-containing protein 050, NAC domain-containing protein 50, SOG1-like
Protein Name NAC DOMAIN-CONTAINING PROTEIN 50
Allele Osnac02
Chromosome No. 2
Explanation the potential candidate gene for An-4 (a potential quantitative trait locus for awn development). a putative AtSOG1 ortholog. OsNAC02 in Yan et al. 2024. TO:0000975: grain width. GO:2000904: regulation of starch metabolic process.
Trait Class Seed - Morphological traits - Endosperm
Character as QTL - Grain quality
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Other
Expression
Sequence/Locus
cDNA Accession No. AK121953
MSU ID LOC_Os02g38130.1
RAP ID Os02g0594800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yan M., Jiao G., Shao G., Chen Y., Zhu M., Yang L., Xie L., Hu P., Tang S.
BMC Plant Biol. 2024  24(1)  196
Chalkiness and premature controlled by energy homeostasis in OsNAC02 KO-mutant during vegetative endosperm development.
Nishizawa-Yokoi A., Motoyama R., Tanaka T., Mori A., Iida K., Toki S.
Plant Physiol. 2022   
SUPPRESSOR OF GAMMA RESPONSE 1 plays rice-specific roles in DNA damage response and repair.
Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009  2  217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008  280(6)  547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
inflorescence development( GO:0010229 )
regulation of starch biosynthetic process( GO:0010581 )
endosperm development( GO:0009960 )
regulation of cell cycle( GO:0051726 )
sucrose metabolic process( GO:0005985 )
Trait Ontology awn length( TO:0000072 )
inflorescence development trait( TO:0000621 )
awn anatomy and morphology trait( TO:0002718 )
chalky endosperm( TO:0000266 )
floury endosperm( TO:0000104 )
endosperm color( TO:0000487 )
grain length( TO:0000734 )
grain thickness( TO:0000399 )
grain yield per plant( TO:0000449 )
amylose content( TO:0000196 )
sugar content( TO:0000333 )
starch grain size( TO:0002655 )
seed quality( TO:0000162 )
crushed grain percentage( TO:0000618 )
Plant Ontology inflorescence development stage( PO:0001083 )
endosperm development stage( PO:0007633 )
root( PO:0009005 )
stem( PO:0009047 )
leaf sheath( PO:0020104 )
flag leaf( PO:0020103 )
Related Strains
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Phenotype images
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Last updated
Aug 30, 2024

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