Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | _ |
| Gene Symbol Synonym | OMT8 |
| CGSNL Gene Name | _ |
| Gene Name Synonym | Oryza miR164-targeted gene 8 |
| Protein Name | |
| Allele | |
| Chromosome No. | 5 |
| Explanation | Q65WW7. LOC_Os05g39650. This is one of the four genes within the candidate gene region on chromosome 5 for root growth QTLs which are upregulated in Azucena compared to Bala. |
| Trait Class |
Biochemical character
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK064856
|
| MSU ID |
LOC_Os05g39650.1
|
| RAP ID |
Os05g0473900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Fang Y., Xie K., Xiong L.
J. Exp. Bot. 2014 65(8) 2119-35 Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice.
|
|
|
Norton GJ,Aitkenhead MJ,Khowaja FS,Whalley WR,Price AH
Genomics 2008 92 344-52 A bioinformatic and transcriptomic approach to identifying positional candidate genes without fine mapping: an example using rice root-growth QTLs.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
plasma membrane( GO:0005886 )
fatty acid metabolic process( GO:0006631 ) L-ascorbic acid binding( GO:0031418 ) metal ion binding( GO:0046872 ) phytanoyl-CoA dioxygenase activity( GO:0048244 ) |
| Trait Ontology | - |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Dec 4, 2015 | |
