Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HMGRII |
| Gene Symbol Synonym | HMGR II, OsHMGRII, Hmg2, HMGR2, HMGR 2, OsHMGR2, OsHMGR2, HMGR1, OsHMGR1 |
| CGSNL Gene Name | 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE II |
| Gene Name Synonym | 3-hydroxy-3-methylglutaryl coenzyme A reductase II, 3-hydroxy-3-methylglutaryl-CoA reductase 2 |
| Protein Name | 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE II |
| Allele | |
| Chromosome No. | 9 |
| Explanation | U95816, U43961. GO: 0060964: regulation of gene silencing by miRNA. HMGR1 in Chen et al. 2018. GO:1902767: isoprenoid biosynthetic process via mevalonate. |
| Trait Class |
Biochemical character
Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK101104
|
| MSU ID |
LOC_Os09g31970.1
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| RAP ID |
Os09g0492700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Jin X., Baysal C., Drapal M., Sheng Y., Huang X., He W., Shi L., Capell T., Fraser P.D., Christou P., Zhu C.
Plants (Basel) 2021 10(7) The Coordinated Upregulated Expression of Genes Involved in MEP, Chlorophyll, Carotenoid and Tocopherol Pathways, Mirrored the Corresponding Metabolite Contents in Rice Leaves during De-Etiolation.
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Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018 A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
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Zhang X., Rerksiri W., Liu A., Zhou X., Xiong H., Xiang J., Chen X., Xiong X.
Gene 2013 530(2) 185-92 Transcriptome profile reveals heat response mechanism at molecular and metabolic levels in rice flag leaf.
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Ha,S.H., Lee,S.W., Kim,Y.M. and Hwang,Y.S.
Mol. Cells 2001 11(3) 295-302 Molecular characterization of Hmg2 gene encoding a 3-hydroxy-methylglutaryl-CoA reductase in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
hydroxymethylglutaryl-CoA reductase (NADPH) activity( GO:0004420 )
coenzyme A metabolic process( GO:0015936 ) integral to membrane( GO:0016021 ) triterpenoid biosynthetic process( GO:0016104 ) sterol biosynthetic process( GO:0016126 ) isopentenyl diphosphate biosynthetic process, mevalonate pathway( GO:0019287 ) hydroxymethylglutaryl-CoA reductase activity( GO:0042282 ) intracellular membrane-bounded organelle( GO:0043231 ) NADP or NADPH binding( GO:0050661 ) response to heat( GO:0009408 ) response to light stimulus( GO:0009416 ) |
| Trait Ontology |
inflorescence development trait( TO:0000621 )
temperature response trait( TO:0000432 ) light sensitivity( TO:0000075 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Mar 7, 2022 | |
