Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | _ |
| Gene Symbol Synonym | OsTCTP, TCTP, OsTCTPa, OsTCTPb, TPH |
| CGSNL Gene Name | _ |
| Gene Name Synonym | 21 kDa polypeptide, translationally controlled tumor protein, TCTP homolog, Tumor protein homolog |
| Protein Name | |
| Allele | |
| Chromosome No. | 11 |
| Explanation | D10966. P35681. GO:0090333: regulation of stomatal closure. GO:0090406: pollen tube. a homolog of TCTPs (human, Drosophila and yeast). the most stable reference genes under aerobic and anaerobic conditions (Phule et al. 2018). |
| Trait Class |
Tolerance and resistance - Stress tolerance
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK105453
|
| MSU ID |
LOC_Os11g43900.1
LOC_Os11g43900.2 |
| RAP ID |
Os11g0660500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018 8(9) 383 Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
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Wang Z.Q., Li G.Z., Gong Q.Q., Li G.X., Zheng S.J.
BMC Plant Biol. 2015 15 123 OsTCTP, encoding a translationally controlled tumor protein, plays an important role in mercury tolerance in rice.
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Diego F Gutiérrez-Galeano, Roberto Toscano-Morales, Berenice Calderón-Pérez, Beatriz Xoconostle-Cázares, Roberto Ruiz-Medrano
Front Plant Sci 2014 5 361 Structural divergence of plant TCTPs.
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Wang F., Shang Y., Yang L., Zhu C.
J Environ Sci (China) 2012 24(12) 2149-58 Comparative proteomic study and functional analysis of translationally controlled tumor protein in rice roots under Hg2+ stress.
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Uchimiya,H., Kidou,S., Shimazaki,T., Aotsuka,S., Takamatsu,S., Nishi,R., Hashimoto,H., Matsubayashi,Y., Kidou,N., Umeda,M. and Kato,A.
Plant J. 1992 2(6) 1005-1009 Random sequencing og cDNA librariesreveals a variety of expressed genes in cultured cells of rice (Oryza sativa L.)
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
auxin homeostasis( GO:0010252 )
cell proliferation( GO:0008283 ) defense response to bacterium( GO:0042742 ) drought recovery( GO:0009819 ) embryonic development( GO:0009790 ) lateral root development( GO:0048527 ) pollen tube growth( GO:0009860 ) positive regulation of microtubule depolymerization( GO:0031117 ) regulation of cell growth( GO:0001558 ) regulation of mitotic cell cycle( GO:0007346 ) regulation of multicellular organism growth( GO:0040014 ) response to cadmium ion( GO:0046686 ) root hair cell tip growth( GO:0048768 ) Golgi apparatus( GO:0005794 ) apoplast( GO:0048046 ) chloroplast( GO:0009507 ) cytosol( GO:0005829 ) nucleus( GO:0005634 ) plasma membrane( GO:0005886 ) plasmodesma( GO:0009506 ) thylakoid( GO:0009579 ) vacuolar membrane( GO:0005774 ) response to mercury ion( GO:0046689 ) response to abscisic acid stimulus( GO:0009737 ) response to hydroperoxide( GO:0033194 ) regulation of hydrogen peroxide biosynthetic process( GO:0010728 ) |
| Trait Ontology |
chemical stress sensitivity( TO:0000482 )
abscisic acid sensitivity( TO:0000615 ) hydrogen peroxide content( TO:0000605 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Sep 9, 2019 | |
