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Basic Information
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CGSNL Gene Symbol
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_
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Gene Symbol Synonym
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OsPAL02, PAL02, OsPAL5, PAL5, OsPAL2, PAL2, OsPAL1
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CGSNL Gene Name
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_
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Gene Name Synonym
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Phenylalanine ammonia-lyase 02
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Protein Name
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Allele
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OsPAL5-CR
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Chromosome No.
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4
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Explanation
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AY224546. OsPAL5 in Tonnessen et al. 2014, Zhou et al. 2018, Xu et al. 2018, Sathe et al. 2019, He et al. 2020, Wang et al. 2022, Liu et al. 2024, Xiang et al. 2025. OsPAL1 in Dangol et al. 2021, Nguyen et al. 2022. GO:1902584: positive regulation of response to water deprivation.
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Trait Class
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Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100346
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MSU ID
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LOC_Os04g43760.1
LOC_Os04g43760.2
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RAP ID
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Os04g0518100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Xiang D., Tu H., Yuan Y., Yao Y., Liao W., Wang H., Yan Y., Wang Y., Chen Y., Liu D., Lv Q., He H., Hu H., Lai X., Yuan M., Xiong H., Dong F., Xiong L.
Adv Sci (Weinh) 2025 12(39) e02662
A Blast-Resistant NLR Gene Confers Drought Resistance by Competitively Interacting with an E3 Ligase to Protect phenylalanine ammonia-lyase in Rice.
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Liu X., Xie Z., Xin J., Yuan S., Liu S., Sun Y., Zhang Y., Jin C.
Plants (Basel) 2024 13(4)
OsbZIP18 Is a Positive Regulator of Phenylpropanoid and Flavonoid Biosynthesis under UV-B Radiation in Rice.
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Shad M.A., Li X., Rao M.J., Luo Z., Li X., Ali A., Wang L.
Int J Mol Sci 2024 25(18)
Exploring Lignin Biosynthesis Genes in Rice: Evolution, Function, and Expression.
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Su P., Kang H., Peng Q., Wicaksono W.A., Berg G., Liu Z., Ma J., Zhang D., Cernava T., Liu Y.
Nat Commun 2024 15(1) 23
Microbiome homeostasis on rice leaves is regulated by a precursor molecule of lignin biosynthesis.
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Nguyen N.K., Wang J., Liu D., Hwang B.K., Jwa N.S.
Front Plant Sci 2022 13 1019669
Rice iron storage protein Ferritin 2 (OsFER2) positively regulates ferroptotic cell death and defense responses against <i>Magnaporthe oryzae</i>.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Dangol S., Nguyen N.K., Singh R., Chen Y., Wang J., Lee H.G., Hwang B.K., Jwa N.S.
Front Plant Sci 2021 12 710794
Mitogen-activated protein kinase OsMEK2 and OsMPK1 Signaling Is Required for Ferroptotic Cell Death in Rice-<i>Magnaporthe oryzae</i> Interactions.
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Xue J., Lu D., Wang S., Lu Z., Liu W., Wang X., Fang Z., He X.
Sci Rep 2021 11(1) 14083
Integrated transcriptomic and metabolomic analysis provides insight into the regulation of leaf senescence in rice.
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He J., Liu Y., Yuan D., Duan M., Liu Y., Shen Z., Yang C., Qiu Z., Liu D., Wen P., Huang J., Fan D., Xiao S., Xin Y., Chen X., Jiang L., Wang H., Yuan L., Wan J.
Proc. Natl. Acad. Sci. U.S.A. 2020 117(1) 271-277
An R2R3 MYB transcription factor confers brown planthopper resistance by regulating the phenylalanine ammonia-lyase pathway in rice.
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Atul Prakash Sathe, Su X., Chen Z., Chen T., Wei X., Tang S., Xiao-Bo Zhang, Jian-Li Wu
Rice (N Y) 2019 12(1) 68
Identification and characterization of a spotted-leaf mutant spl40 with enhanced bacterial blight resistance in rice.
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Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018 18(1) 264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
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Zhou X., Liao H., Chern M., Yin J., Chen Y., Wang J., Zhu X., Chen Z., Yuan C., Zhao W., Wang J., Li W., He M., Ma B., Wang J., Qin P., Chen W., Wang Y., Liu J., Qian Y., Wang W., Wu X., Li P., Zhu L., Li S., Ronald P.C., Chen X.
Proc. Natl. Acad. Sci. U.S.A. 2018 115(12) 3174-3179
Loss of function of a rice TPR-domain RNA-binding protein confers broad-spectrum disease resistance.
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Yang X., Gong P., Li K., Huang F., Cheng F., Pan G.
J. Exp. Bot. 2016 67(9) 2761-76
A single cytosine deletion in the OsPLS1 gene encoding vacuolar-type H+-ATPase subunit A1 leads to premature leaf senescence and seed dormancy in rice.
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You Q., Zhai K., Yang D., Yang W., Wu J., Liu J., Pan W., Wang J., Zhu X., Jian Y., Liu J., Zhang Y., Deng Y., Li Q., Lou Y., Xie Q., He Z.
Cell Host Microbe 2016 20(6) 758-769
An E3 Ubiquitin Ligase-BAG Protein Module Controls Plant Innate Immunity and Broad-Spectrum disease resistance.
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Duan L., Liu H., Li X., Xiao J., Wang S.
Physiol Plant 2014
Multiple phytohormones and phytoalexins are involved in disease resistance to Magnaporthe oryzae invaded from roots in rice.
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Tonnessen B.W., Manosalva P., Lang J.M., Baraoidan M., Bordeos A., Mauleon R., Oard J., Hulbert S., Leung H., Leach J.E.
Plant Mol. Biol. 2014
Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance.
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Wu Z., Gui S., Wang S., Ding Y.
BMC Evol. Biol. 2014 14 100
Molecular evolution and functional characterisation of an ancient phenylalanine ammonia-lyase gene (NnPAL1) from Nelumbo nucifera: novel insight into the evolution of the PAL family in angiosperms.
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Rawal H.C., Singh N.K., Sharma T.R.
International Journal of Genomics 2013 2013 678969
Conservation, divergence, and genome-wide distribution of PAL and POX A gene families in plants
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Giberti S., Bertea C.M., Narayana R., Maffei M.E., Forlani G.
J. Plant Physiol. 2012 169(3) 249-54
Two phenylalanine ammonia lyase isoforms are involved in the elicitor-induced response of rice to the fungal pathogen Magnaporthe oryzae.
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Gupta S.K., Rai A.K., Kanwar S.S., Chand D., Singh N.K., Sharma T.R.
J. Exp. Bot. 2012 63(2) 757-72
The single functional blast resistance gene Pi54 activates a complex defence mechanism in rice.
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Lin YZ,Chen HY,Kao R,Chang SP,Chang SJ,Lai EM
Phytochemistry 2008 69 715-28
Proteomic analysis of rice defense response induced by probenazole.
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Cooper,B., Hutchison,D., Park,S., Guimil,S., Luginbuhl,P., Ellero,C., Goff,S.A. and Glazebrook,J.
Plant Mol. Biol. 2003 53(3) 273-279
Identification of rice (Oryza sativa) proteins linked to the cyclin-mediated regulation of the cell cycle.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to water deprivation( GO:0009414 )
response to UV-B( GO:0010224 )
modification by host of symbiont morphology or physiology( GO:0051851 )
phenylpropanoid biosynthetic process( GO:0009699 )
defense response to bacterium( GO:0042742 )
defense response to fungus( GO:0050832 )
defense response to insect( GO:0002213 )
phenylalanine ammonia-lyase activity( GO:0045548 )
cytoplasm( GO:0005737 )
L-phenylalanine catabolic process( GO:0006559 )
cinnamic acid biosynthetic process( GO:0009800 )
defense response( GO:0006952 )
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Trait Ontology
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blast disease( TO:0000074 )
biotic stress trait( TO:0000179 )
brown planthopper resistance( TO:0000424 )
bacterial blight disease resistance( TO:0000175 )
UV-B light sensitivity( TO:0000601 )
drought tolerance( TO:0000276 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Nov 28, 2025
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Update info.