Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MATE2
Gene Symbol Synonym OsMATE2
CGSNL Gene Name MULTIDRUG AND TOXIC COMPOUND EXTRUSION PROTEIN 2
Gene Name Synonym Multidrug and Toxic compound Extrusion protein 2
Protein Name MULTIDRUG AND TOXIC COMPOUND EXTRUSION PROTEIN 2
Allele
Chromosome No. 3
Explanation KC631818.1. a target of osa-miR1846 (osa-miR1846a-5p and osa-miR1846b-5p). TO:0006054: arsenic content trait.
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK073902
MSU ID LOC_Os05g48040.1
LOC_Os05g48040.2
LOC_Os05g48040.3
LOC_Os05g48040.4
RAP ID Os05g0554000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Li M., Li W., Zhao M., Li Z., Wang G.L., Liu W., Liang C.
BMC Genomics 2023  24(1)  643
Transcriptome analysis reveals a lncRNA-miRNA-mRNA regulatory network in OsRpp30-mediated disease resistance in rice.
Lee S.B., Kim G.J., Shin J.D., Chung W., Park S.K., Choi G.H., Park S.W., Park Y.J.
Front Plant Sci 2022  13  905842
Genome-Scale Profiling and High-Throughput Analyses Unravel the Genetic Basis of Arsenic Content Variation in Rice.
Das N., Bhattacharya S., Bhattacharyya S., Maiti M.K.
Plant Mol. Biol. 2018  98(1-2)  101-120
Expression of rice MATE family transporter OsMATE2 modulates arsenic accumulation in tobacco and rice.
Tiwari M., Sharma D., Singh M., Tripathi R.D., Trivedi P.K.
Sci Rep 2014  4  3964
Expression of OsMATE1 and OsMATE2 alters development, stress responses and pathogen susceptibility in Arabidopsis.
DB Reference
Gramene ID -
Ontologies
Gene Ontology drug transporter activity( GO:0015238 )
antiporter activity( GO:0015297 )
cadmium ion transport( GO:0015691 )
response to wounding( GO:0009611 )
sequestering of metal ion( GO:0051238 )
response to arsenic( GO:0046685 )
vacuolar membrane( GO:0005774 )
chloroplast( GO:0009507 )
Trait Ontology stress trait( TO:0000164 )
disease resistance( TO:0000112 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 25, 2023

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