Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CNGC17
Gene Symbol Synonym OsCNGC17, OsCNGC5, OsSTA282
CGSNL Gene Name CYCLIC NUCLEOTIDE GATED CHANNEL 17
Gene Name Synonym Cyclic nucleotide gated channel 17, Cyclic nucleotide-gated ion channel 5
Protein Name
Allele
Chromosome No. 12
Explanation LOC_Os12g28260. OsCNGC5 in Nawaz et al. 2014. a mature anther-preferentially expressed gene.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK240644
MSU ID LOC_Os12g28260.1
RAP ID Os12g0468500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Ling S., Chen C., Wang Y., Sun X., Lu Z., Ouyang Y., Yao J.
BMC Genomics 2015  16  101
The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Nawaz Z., Kakar K.U., Saand M.A., Shu Q.Y.
BMC Genomics 2014  15(1)  853
Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses.
TextPresso Search Search textpresso for CNGC17 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology plasma membrane( GO:0005886 )
response to cold( GO:0009409 )
response to ethylene stimulus( GO:0009723 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
response to abscisic acid stimulus( GO:0009737 )
Trait Ontology ethylene sensitivity( TO:0000173 )
cold tolerance( TO:0000303 )
abscisic acid sensitivity( TO:0000615 )
auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
Plant Ontology anther( PO:0009066 )
Related Strains
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Phenotype images
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Last updated
Jun 5, 2015


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