Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CDS1
Gene Symbol Synonym OsCNGC15, CNGC15, OsCNGC9, CNGC9, OsCDS1
CGSNL Gene Name CELL DEATH AND SUSCEPTIBLE TO BLAST 1
Gene Name Synonym Cyclic nucleotide gated channel 15, Cyclic nucleotide-gated ion channel 9
Protein Name CYCLIC NUCLEOTIDE GATED CHANNEL 15
Allele cds1, Oscngc9, Oscngc9-1, Oscngc9-2
Chromosome No. 9
Explanation OsCNGC9 in Nawaz et al. 2014, Wang et al. 2019, Jia et al. 2022, Lee et al. 2022, Ouyang et al. 2023, Wang et al. 2023, Wu et al. 2024. GO:0140426: PAMP-triggered immunity signalling pathway. GO:0035585: calcium-mediated signaling using extracellular calcium source. GO:1900150: regulation of defense response to fungus. TO:0001150: chilling stress response.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK102179
MSU ID LOC_Os09g38580.1
LOC_Os09g38580.3
LOC_Os09g38580.4
LOC_Os09g38580.5
RAP ID Os09g0558300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wu J., Liu H., Zhang Y., Zhang Y., Li D., Liu S., Lu S., Wei L., Hua J., Zou B.
New Phytol. 2024  242(5)  2077-2092
A major gene for chilling tolerance variation in Indica rice codes for a kinase OsCTK1 that phosphorylates multiple substrates under cold.
Ouyang Q., Zhang Y., Yang X., Yang C., Hou D., Liu H., Xu H.
Plants (Basel) 2023  12(15) 
Overexpression of <i>OsPIN9</i> Impairs Chilling Tolerance via Disturbing ROS Homeostasis in Rice.
Wang X., Wu F., Zhang J., Bao Y., Wang N., Dou G., Meng D., Wang X., Li J., Shi Y.
Plants (Basel) 2023  12(24) 
Identification of the CNGC Gene Family in Rice and Mining of Alleles for Application in Rice Improvement.
Lee S.K., Lee S.M., Kim M.H., Park S.K., Jung K.H.
Plants (Basel) 2022  11(22) 
Genome-Wide Analysis of Cyclic Nucleotide-Gated Channel Genes Related to pollen Development in Rice.
Jia M., Meng X., Song X., Zhang D., Kou L., Zhang J., Jing Y., Liu G., Liu H., Huang X., Wang Y., Yu H., Li J.
Cell Discov 2022  8(1)  71
Chilling-induced phosphorylation of ipa1 by OsSAPK6 activates chilling tolerance responses in rice.
Wang J., Liu X., Zhang A., Ren Y., Wu F., Wang G., Xu Y., Lei C., Zhu S., Pan T., Wang Y., Zhang H., Wang F., Tan Y.Q., Wang Y., Jin X., Luo S., Zhou C., Zhang X., Liu J., Wang S., Meng L., Wang Y., Chen X., Lin Q., Zhang X., Guo X., Cheng Z., Wang J., Tian Y., Liu S., Jiang L., Wu C., Wang E., Zhou J.M., Wang Y.F., Wang H., Wan J.
Cell Res. 2019  29(10)  820-831
A cyclic nucleotide-gated channel mediates cytoplasmic calcium elevation and disease resistance in rice.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Nawaz Z., Kakar K.U., Saand M.A., Shu Q.Y.
BMC Genomics 2014  15(1)  853
Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to molecule of bacterial origin( GO:0002237 )
response to chitin( GO:0010200 )
respiratory burst during defense response( GO:0002679 )
regulation of programmed cell death( GO:0043067 )
calcium channel activity( GO:0005262 )
calcium ion transmembrane transport( GO:0070588 )
positive regulation of innate immune response( GO:0045089 )
ion transmembrane transport( GO:0034220 )
ion channel activity( GO:0005216 )
integral to membrane( GO:0016021 )
plasma membrane( GO:0005886 )
defense response to bacterium( GO:0042742 )
response to cold( GO:0009409 )
response to abscisic acid stimulus( GO:0009737 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
response to ethylene stimulus( GO:0009723 )
defense response to fungus( GO:0050832 )
pattern recognition receptor signaling pathway( GO:0002221 )
calcium-mediated signaling( GO:0019722 )
Trait Ontology bacterial disease resistance( TO:0000315 )
bacterial blight disease resistance( TO:0000175 )
cold tolerance( TO:0000303 )
abscisic acid sensitivity( TO:0000615 )
auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
ethylene sensitivity( TO:0000173 )
blast disease( TO:0000074 )
mimic response( TO:0000063 )
Plant Ontology leaf( PO:0025034 )
leaf mesophyll( PO:0005645 )
stem( PO:0009047 )
Related Strains
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Phenotype images
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Last updated
Feb 27, 2026

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