|
Basic Information
|
|
CGSNL Gene Symbol
|
_
|
|
Gene Symbol Synonym
|
OsbHLH138, bHLH138, OsPIF4, PIF4, OsSACL2, SACL2
|
|
CGSNL Gene Name
|
_
|
|
Gene Name Synonym
|
basic helix-loop-helix protein 138, Phytochrome-interacting factor 4
|
|
Protein Name
|
|
|
Allele
|
|
|
Chromosome No.
|
3
|
|
Explanation
|
a member of the SAC51 family. GO:1904583: response to polyamine macromolecule.
|
|
Trait Class
|
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK065674
|
|
MSU ID
|
LOC_Os03g27390.1
LOC_Os03g27390.2
|
|
RAP ID
|
Os03g0391700
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Kamara N., Jiao Y., Huang W., Cao L., Zhu L., Zhao C., Huang X., Shivute F.N., Liu X., Wu J., Shahid M.Q.
Front Plant Sci 2023 14 1229870
Comparative cytological and transcriptome analyses of <i>ny2</i> mutant delayed degeneration of tapetal cells and promotes abnormal microspore development in neo-tetraploid rice.
|
|
Wen J., Wang L., Wang J., Zeng Y., Xu Y., Li S.
Theor. Appl. Genet. 2019 132(6) 1721-1732
The transcription factor OsbHLH138 regulates thermosensitive genic male sterility in rice via activation of tms5.
|
|
Miyamoto M., Shimao S., Tong W., Motose H., Takahashi T.
Plants (Basel) 2019 8(8)
Effect of Thermospermine on the Growth and Expression of Polyamine-Related Genes in Rice Seedlings.
|
|
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
nucleus( GO:0005634 )
response to temperature stimulus( GO:0009266 )
protein dimerization activity( GO:0046983 )
|
|
Trait Ontology
|
genic male sterility-thermo sensitive( TO:0000067 )
temperature response trait( TO:0000432 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Nov 20, 2023
|
Update info.