Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RHL1
Gene Symbol Synonym OsbHLH115, bHLH115, OsRHL1
CGSNL Gene Name ROOTHAIRLESS1
Gene Name Synonym basic helix-loop-helix protein 115, ROOTHAIRLESS 1
Protein Name BASIC HELIX-LOOP-HELIX PROTEIN 115
Allele Osrhl1-1, Osrhl1-2, osrhl1, rhl1, rhl1-1
Chromosome No. 6
Explanation a LOTUS JAPONICUS ROOTHAIRLESS1-LIKE (LRL) gene.
Trait Class Vegetative organ - Root
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os06g08500.1
RAP ID Os06g0184000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Siangliw J.L., Thunnom B., Natividad M.A., Quintana M.R., Chebotarov D., McNally K.L., Lynch J.P., Brown K.M., Henry A.
Front Plant Sci 2022  13  1008954
Response of Southeast Asian rice root architecture and anatomy phenotypes to drought stress.
Zhang Y., Du H., Gui Y., Xu F., Liu J., Zhang J., Xu W.
J. Exp. Bot. 2020  71(9)  2740-2751
Moderate water stress in rice induces rhizosheath formation associated with abscisic acid and auxin responses.
Moon S., Cho L.H., Kim Y.J., Gho Y.S., Jeong H.Y., Hong W.J., Lee C., Park H., Jwa N.S., Dangol S., Chen Y., Park H., Cho H.S., An G., Jung K.H.
Plant Physiol. 2019  179(2)  558-568
RSL Class II Transcription Factors Guide the Nuclear Localization of RHL1 to Regulate root hair Development.
Tam T.H., Catarino B., Dolan L.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(29)  E3959-68
Conserved regulatory mechanism controls the development of cells with rooting functions in land plants.
Ding W., Yu Z., Tong Y., Huang W., Chen H., WU P.
Cell Res. 2009  19(11)  1309-11
A transcription factor with a bHLH domain regulates root hair development in rice.
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006  141(4)  1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
DB Reference
Gramene ID -
Ontologies
Gene Ontology basipetal auxin transport( GO:0010540 )
root hair elongation( GO:0048767 )
cytoplasm( GO:0005737 )
nucleus( GO:0005634 )
Trait Ontology root hair length( TO:0002665 )
root development trait( TO:0000656 )
abscisic acid content( TO:0002667 )
crown root number( TO:0002685 )
Plant Ontology 5 root hair formation stage( PO:0007519 )
Related Strains
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Phenotype images
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Last updated
Feb 10, 2023

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