Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SGI1 |
| Gene Symbol Synonym | OsbHLH111, bHLH111, HBP1, OsHBP1, OsSGI1 |
| CGSNL Gene Name | STARVATION- ASSOCIATED GROWTH INHIBITOR 1 |
| Gene Name Synonym | basic helix-loop-helix protein 111, Hd1 Binding Protein 1, starvation- associated growth inhibitor 1 |
| Protein Name | BASIC HELIX-LOOP-HELIX PROTEIN 111 |
| Allele | sgi1-1, sgi1-2, sgi1-3, hbp1-1, hbp1-2, hbp1-3 |
| Chromosome No. | 4 |
| Explanation | GO:1905614: negative regulation of developmental vegetative growth. TO:0000975: grain width. TO:0003021: panicle dry weight. TO:0003020: panicle fresh weight. |
| Trait Class |
Vegetative organ - Culm
Vegetative organ - Root Reproductive organ - Heading date Seed - Morphological traits - Grain shape Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity Character as QTL - Plant growth activity Character as QTL - Germination |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK062301
|
| MSU ID |
LOC_Os04g41229.1
LOC_Os04g41229.2 |
| RAP ID |
Os04g0489600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Wang K., Li M., Zhang B., Chang Y., An S., Zhao W.
Plant Biotechnol. J. 2023 Sugar starvation activates the OsSnRK1a-OsbHLH111/OsSGI1-OsTPP7 module to mediate growth inhibition of rice.
|
|
|
Yin Y., Yan Z., Guan J., Huo Y., Wang T., Li T., Cui Z., Ma W., Wang X., Chen W.
Plant Physiol. 2023 192(1) 205-221 Two interacting basic helix-loop-helix transcription factors control flowering time in rice.
|
|
|
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84 Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
circadian rhythm( GO:0007623 )
response to nutrient levels( GO:0031667 ) cellular response to sucrose starvation( GO:0043617 ) negative regulation of seed germination( GO:0010187 ) sugar mediated signaling( GO:0010182 ) carbohydrate metabolic process( GO:0005975 ) negative regulation of growth( GO:0045926 ) negative regulation of developmental process( GO:0051093 ) response to starvation( GO:0042594 ) carbohydrate homeostasis( GO:0033500 ) nucleus( GO:0005634 ) regulation of gene expression( GO:0010468 ) mRNA transcription( GO:0009299 ) negative regulation of long-day photoperiodism, flowering( GO:0048579 ) negative regulation of short-day photoperiodism, flowering( GO:0048577 ) photoperiodism, flowering( GO:0048573 ) |
| Trait Ontology |
days to heading( TO:0000137 )
flowering time( TO:0002616 ) nutrient sensitivity( TO:0000480 ) grain size( TO:0000397 ) growth and development trait( TO:0000357 ) germination rate( TO:0000430 ) root length( TO:0000227 ) root number( TO:0000084 ) plant fresh weight( TO:0000442 ) plant height( TO:0000207 ) grain length( TO:0000734 ) 1000-seed weight( TO:0000382 ) sucrose content( TO:0000328 ) fructose content( TO:0006005 ) glucose content( TO:0000300 ) secondary branch number( TO:0000557 ) leaf dry weight( TO:0001014 ) panicle weight( TO:0000014 ) grain width( TO:0000402 ) grain number per plant( TO:0000440 ) grain yield( TO:0000396 ) |
| Plant Ontology |
whole plant( PO:0000003 )
|
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Feb 14, 2025 | |
