Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | BHLH083 |
| Gene Symbol Synonym | OsbHLH083, bHLH083, CRPG311, OsCRPG311 |
| CGSNL Gene Name | BASIC HELIX-LOOP-HELIX PROTEIN 83 |
| Gene Name Synonym | basic helix-loop-helix protein 083, collar region-preferential gene 311 |
| Protein Name | BASIC HELIX-LOOP-HELIX PROTEIN 83 |
| Allele | |
| Chromosome No. | 5 |
| Explanation | HQ858853. bHLH transcription factor. one of five transcription factors downstream of LG1 (Jiang et al. 2023). |
| Trait Class |
Other
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK065864
|
| MSU ID |
LOC_Os05g01256.1
LOC_Os05g01256.2 |
| RAP ID |
Os05g0103000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Jiang X., Hong W.J., Lee S.K., Jung K.H.
Plants (Basel) 2023 12(16) Genome-Wide Identification and Analysis of Collar Region-Preferential Genes in Rice.
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Yilmaz,A., Nishiyama,M.Y. Jr., Fuentes,B.G., Souza,G.M., Janies,D., Gray,J. and Grotewold,E.
Plant Physiol. 2009 149(1) 171-180 GRASSIUS: a platform for comparative regulatory genomics across the grasses
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Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84 Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
nucleus( GO:0005634 )
regulation of transcription, DNA-dependent( GO:0006355 ) protein dimerization activity( GO:0046983 ) transcription factor activity( GO:0003700 ) |
| Trait Ontology | - |
| Plant Ontology |
leaf collar( PO:0006012 )
|
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 29, 2023 | |
