Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol BLR1
Gene Symbol Synonym OsbHLH079, OsbHLH79, bHLH079, bHLH79, OsBLR1, OsBCL2, BCL2, OsCIBL1, CIBL1
CGSNL Gene Name BRASSINOSTEROID-RESPONSIVE LEAF ANGLE REGULATOR 1
Gene Name Synonym basic helix-loop-helix protein 079, Basic Helix-Loop-Helix 79, OsBC1-Like2, BC1-Like 2, CRYPTOCHROME-INTERACTING BASIC HELIX-LOOP-HELIX 1-LIKE 1
Protein Name BASIC HELIX-LOOP-HELIX PROTEIN 79
Allele blr1-D, blr1-1, blr1-2, blr1-3, osbhlh079-D, osbhlh079, osbhlh079-1, osbhlh079-2, oscib1l, oscib1l-D, oscib1l-1, oscib1l-2
Chromosome No. 2
Explanation an Ortholog of Arabidopsis CIB1 (CRYPTOCHROME-INTERACTING bHLH 1). GO:1900459: positive regulation of brassinosteroid mediated signaling pathway. TO:0000821: leaf vein size. GO:0071555: cell wall organization. TO:0000993: cellulose content. GO:1900056: negative regulation of leaf senescence. GO:1903647: negative regulation of chlorophyll catabolic process.
Trait Class Vegetative organ - Leaf
Reproductive organ - Heading date
Coloration - Chlorophyll
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK119183
MSU ID LOC_Os02g47660.1
RAP ID Os02g0705500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Lee S.J., Kim Y., Kang K., Yoon H., Kang J., Cho S.H., Paek N.C.
Plant Cell Environ. 2024  47(12)  4498-4515
rice CRYPTOCHROME-INTERACTING BASIC HELIX-LOOP-HELIX 1-LIKE interacts with OsCRY2 and promotes flowering by upregulating Early heading date 1.
Kim S.H., Yoon J., Kim H., Lee S.J., Paek N.C.
Rice (N Y) 2023  16(1)  60
Rice Basic Helix-Loop-Helix 079 (OsbHLH079) Delays leaf senescence by Attenuating ABA Signaling.
Jang S., Cho J.Y., Do G.R., Kang Y., Li H.Y., Song J., Kim H.Y., Kim B.G., Hsing Y.I.
Int J Mol Sci 2021  22(15) 
Modulation of Rice leaf angle and grain size.by Expressing <i>OsBCL1</i> and <i>OsBCL2</i> under the Control of <i>OsBUL1</i> Promoter.
Seo H., Kim S.H., Lee B.D., Lim J.H., Lee S.J., An G., Paek N.C.
Int J Mol Sci 2020  21(6) 
The Rice <i>Basic Helix-Loop-Helix 79</i> (<i>OsbHLH079</i>) Determines leaf angle and Grain Shape.
Wang K., Meng-Qi Li, Yan-Peng Chang, Zhang B., Quan-Zhi Zhao, Wen-Li Zhao
Plant Mol. Biol. 2020  102(6)  589-602
The basic helix-loop-helix transcription factor OsBLR1 regulates leaf angle in rice via brassinosteroid signalling.
Minh-Thu PT., Kim J.S., Chae S., Jun K.M., Lee G.S., Kim D.E., Cheong J.J., Song S.I., Nahm B.H., Kim Y.K.
Mol. Cells 2018  41(8)  781-798
A WUSCHEL Homeobox Transcription Factor, OsWOX13, Enhances Drought Tolerance and Triggers Early Flowering in Rice.
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006  141(4)  1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to blue light( GO:0009637 )
positive regulation of short-day photoperiodism, flowering( GO:0048576 )
positive regulation of long-day photoperiodism, flowering( GO:0048578 )
leaf senescence( GO:0010150 )
response to abscisic acid stimulus( GO:0009737 )
leaf development( GO:0048366 )
chlorophyll catabolic process( GO:0015996 )
response to absence of light( GO:0009646 )
negative regulation of abscisic acid mediated signaling( GO:0009788 )
positive regulation of transcription, DNA-dependent( GO:0045893 )
positive regulation of gibberellin biosynthetic process( GO:0010372 )
positive regulation of unidimensional cell growth( GO:0051512 )
regulation of cell growth( GO:0001558 )
auxin mediated signaling pathway( GO:0009734 )
photoperiodism, flowering( GO:0048573 )
nucleus( GO:0005634 )
sequence-specific DNA binding( GO:0043565 )
protein dimerization activity( GO:0046983 )
transcription factor activity( GO:0003700 )
brassinosteroid mediated signaling( GO:0009742 )
response to brassinosteroid stimulus( GO:0009741 )
negative regulation of cell growth( GO:0030308 )
Trait Ontology leaf angle( TO:0000206 )
grain length( TO:0000734 )
brassinosteroid sensitivity( TO:0002677 )
leaf development trait( TO:0000655 )
grain shape( TO:0002730 )
days to heading( TO:0000137 )
brassinosteroid content( TO:0002676 )
grain size( TO:0000397 )
grain yield( TO:0000396 )
gibberellic acid content( TO:0002675 )
cell elongation trait( TO:0002687 )
leaf senescence( TO:0000249 )
abscisic acid sensitivity( TO:0000615 )
light intensity sensitivity( TO:0000460 )
leaf color( TO:0000326 )
chlorophyll content( TO:0000495 )
abscisic acid content( TO:0002667 )
relative chlorophyll content( TO:0001016 )
flowering time( TO:0002616 )
blue light sensitivity( TO:0000159 )
Plant Ontology coleoptile( PO:0020033 )
root( PO:0009005 )
palea( PO:0009038 )
lemma( PO:0009037 )
lodicule( PO:0009036 )
anther( PO:0009066 )
stigma( PO:0009073 )
4 leaf senescence stage( PO:0001054 )
Related Strains
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Phenotype images
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Last updated
Jan 16, 2025

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