Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | BHLH38 |
| Gene Symbol Synonym | OsbHLH038, bHLH038, OsbHLH38 |
| CGSNL Gene Name | BASIC HELIX-LOOP-HELIX PROTEIN 38 |
| Gene Name Synonym | basic helix-loop-helix protein 038 |
| Protein Name | BASIC HELIX-LOOP-HELIX PROTEIN 38 |
| Allele | |
| Chromosome No. | 8 |
| Explanation | qTAC8 (a QTL controlling rice tiller angle) candidate. |
| Trait Class |
Tolerance and resistance - Stress tolerance
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK109616
|
| MSU ID |
LOC_Os08g33590.1
|
| RAP ID |
Os08g0432800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Du F., Wang Y., Wang J., Li Y., Zhang Y., Zhao X., Xu J., Li Z., Zhao T., Wang W., Fu B.
J Integr Plant Biol 2023 The basic helix-loop-helix transcription factor gene, OsbHLH38, plays a key role in controlling rice salt tolerance.
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He J., Shao G., Wei X., Huang F., Sheng Z., Tang S., Hu P.
PLoS ONE 2017 12(5) e0178177 Fine mapping and candidate gene analysis of qTAC8, a major quantitative trait locus controlling tiller angle in rice (Oryza sativa L.).
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Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84 Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
DNA binding( GO:0003677 )
nucleus( GO:0005634 ) response to hydrogen peroxide( GO:0042542 ) response to jasmonic acid stimulus( GO:0009753 ) response to abscisic acid stimulus( GO:0009737 ) response to oxidative stress( GO:0006979 ) response to osmotic stress( GO:0006970 ) response to cold( GO:0009409 ) response to water deprivation( GO:0009414 ) response to salt stress( GO:0009651 ) |
| Trait Ontology |
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 ) osmotic response sensitivity( TO:0000095 ) drought tolerance( TO:0000276 ) abscisic acid sensitivity( TO:0000615 ) jasmonic acid sensitivity( TO:0000172 ) oxidative stress( TO:0002657 ) sodium to potassium content ratio( TO:0000525 ) proline content( TO:0006002 ) abscisic acid content( TO:0002667 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Sep 21, 2023 | |
