Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym JMJ711, OsFbox149, Os_F0347, DLN88, OsDLN88, OsFBO14, FBO14
CGSNL Gene Name _
Gene Name Synonym Jumonji 711, F-box protein 149, DLN repressor 88, DLN motif protein 88, F-box-type E3 ubiquitin ligase O14
Protein Name
Allele
Chromosome No. 3
Explanation JmjC domain containing protein. Os_F0347 in Hua et al. 2011.
Trait Class
Expression
Sequence/Locus
cDNA Accession No. AK065339
MSU ID LOC_Os03g27250.1
RAP ID Os03g0389900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019  20(7) 
Analysis of Rice Proteins with DLN repressor Motif/S.
Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011  6(1)  e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(3)  835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
Yang X., Udaya C Kalluri, Jawdy S., Lee E Gunter, Yin T., Timothy J Tschaplinski, David J Weston, Ranjan P., Gerald A Tuskan
Plant Physiol. 2008  148(3)  1189-200
The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants.
Sun Q,Zhou DX
Proc. Natl. Acad. Sci. U.S.A. 2008  105  13679-84
Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development.
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007  143(4)  1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology transferase activity, transferring phosphorus-containing groups( GO:0016772 )
cytosol( GO:0005829 )
metabolic process( GO:0008152 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 1, 2023

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