Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol TPS13
Gene Symbol Synonym TPS3, OsSTP3, OsTPS28, TPS28, OsTPS13, TPS35, OsTPS35, OsECBS, ECBS
CGSNL Gene Name TERPENE SYNTHASE 13
Gene Name Synonym TERPENE SYNTHASE3, terpene synthase 3, terpene synthase 28, ent-casbene synthase
Protein Name TERPENE SYNTHASE 13
Allele
Chromosome No. 7
Explanation a JA-induced gene. OsTPS28 in Lee et al. 2014, Ozawa et al. 2017, Zhan et al. 2020. one of three STPSs (sesquiterpene synthase). OsTPS13 in Kamolsukyunyong et al. 2013. TPS35 in Sun et al. 2022.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. DQ872159
MSU ID LOC_Os07g11790.1
RAP ID Os07g0218200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Sun Y., Zhang P.T., Kou D.R., Han Y.C., Fang J.C., Ni J.P., Jiang B., Wang X., Zhang Y.J., Wang W., Kong X.D.
Front Plant Sci 2022  13  905982
Terpene Synthases in Rice Pan-Genome and Their Responses to <i>Chilo suppressalis</i> Larvae Infesting.
Liang J., Shen Q., Wang L., Liu J., Fu J., Zhao L., Xu M., Peters R.J., Wang Q.
New Phytol. 2021  231(1)  85-93
Rice contains a biosynthetic gene cluster associated with production of the casbane-type diterpenoid phytoalexin ent-10-oxodepressin.
Zhan C., Lei L., Liu Z., Zhou S., Yang C., Zhu X., Guo H., Zhang F., Peng M., Zhang M., Li Y., Yang Z., Sun Y., Shi Y., Li K., Liu L., Shen S., Wang X., Shao J., Jing X., Wang Z., Li Y., Czechowski T., Hasegawa M., Graham I., Tohge T., Qu L., Liu X., Fernie A.R., Chen L.L., Yuan M., Luo J.
Nat Plants 2020  6(12)  1447-1454
Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance.
Ogawa S., Kawahara-Miki R., Miyamoto K., Yamane H., Nojiri H., Tsujii Y., Okada K.
Biochem. Biophys. Res. Commun. 2017  486(3)  796-803
OsMYC2 mediates numerous defence-related transcriptional changes via jasmonic acid signalling in rice.
Lee G.W., Lee S., Chung M.S., Jeong Y.S., Chung B.Y.
Protoplasma 2014   
Rice terpene synthase 20 (OsTPS20) plays an important role in producing terpene volatiles in response to abiotic stresses.
Li T., Chen X., Zhong X., Zhao Y., Liu X., Zhou S., Cheng S., Zhou D.X.
Plant Cell 2013  25(11)  4725-36
Jumonji C Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice.
Kamolsukyunyong,W., Sukhaket,W., Ruanjaichon,V., Toojinda,T. and Vanavichit,A.
Rice (N Y) 2013  6(1)  18
Single-feature polymorphism mapping of isogenic rice lines identifies the influence of terpene synthase on brown planthopper feeding preferences
DB Reference
Gramene ID -
Ontologies
Gene Ontology magnesium ion binding( GO:0000287 )
jasmonic acid mediated signaling pathway( GO:0009867 )
terpene synthase activity( GO:0010333 )
defense response to insect( GO:0002213 )
diterpene phytoalexin biosynthetic process( GO:0051502 )
defense response to bacterium( GO:0042742 )
response to jasmonic acid stimulus( GO:0009753 )
casbene synthase activity( GO:0050449 )
response to UV( GO:0009411 )
defense response to fungus( GO:0050832 )
response to salicylic acid stimulus( GO:0009751 )
Trait Ontology jasmonic acid sensitivity( TO:0000172 )
insect damage resistance( TO:0000261 )
stem borer resistance( TO:0000454 )
bacterial blight disease resistance( TO:0000175 )
blast disease( TO:0000074 )
diterpenoid phytoalexin content( TO:0002669 )
UV light sensitivity( TO:0000160 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Mar 1, 2023

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