Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PRO16.2
Gene Symbol Synonym Prol-17, OsEnS-88, pro16.2, OsPRO16.2, PROLM24
CGSNL Gene Name 16 KDA PROLAMIN 2
Gene Name Synonym 16 kDa prolamin, cystein-rich 16.6-kDa prolamin, endosperm-specific gene 88, , 16 kDa prolamin 2
Protein Name 16 KDA PROLAMIN 2
Allele
Chromosome No. 6
Explanation EF122449. FJ940202. AY427574 (promoter). PROLM24 in Huang et al. 2016.
Trait Class Seed - Physiological traits - Storage substances
Expression
Sequence/Locus
cDNA Accession No. AK107785
MSU ID LOC_Os06g31070.1
RAP ID Os06g0507200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu Z., Li P., Yu L., Hu Y., Du A., Fu X., Wu C., Luo D., Hu B., Dong H., Jiang H., Ma X., Huang W., Yang X., Tu S., Li H.
Int J Mol Sci 2023  24(9) 
<i>OsMADS1</i> Regulates Grain Quality, Gene Expressions, and Regulatory Networks of Starch and Storage Protein Metabolisms in Rice.
Wang J., Chen Z., Zhang Q., Meng S., Wei C.
Plant Physiol. 2020  184(4)  1775-1791
The NAC Transcription Factors OsNAC20 and OsNAC26 Regulate Starch and Storage Protein Synthesis.
Huang X., Lu Z., Wang X., Ouyang Y., Chen W., Xie K., Wang D., Luo M., Luo J., Yao J.
Plant J. 2016   
Imprinted gene OsFIE1 modulates rice seed development by influencing nutrient metabolism and modifying genome H3K27me3.
Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013  530(2)  236-47
Genome-wide analysis of endosperm-specific genes in rice.
Saito Y., Shigemitsu T., Yamasaki R., Sasou A., Goto F., Kishida K., Kuroda M., Tanaka K., Morita S., Satoh S., Masumura T.
Plant J. 2012  70(6)  1043-55
Formation mechanism of the internal structure of type I protein bodies in rice endosperm: relationship between the localization of prolamin species and the expression of individual genes.
Yoon U.H., Lee J., Hahn J.H., Kim Y.K., Lee G.S., Ji H.S., Kim C.K., Mun J.H., Kim Y.M., Kim T.H.
Plant Biotechnol Rep 2012  6  251-262
Structural and expression analysis of prolamin genes in Oryza sativa L
Qu,L.Q. and Takaiwa,F.
Plant Biotechnol J. 2004  2(2)  113-125
Evaluation of tissue specificity and expression strength of rice seed component gene promoters in transgenic rice
N Mitsukawa, R Konishi, M Uchiki, T Masumura, K Tanaka
Biosci. Biotechnol. Biochem. 1999  63(11)  1851-8
Molecular cloning and characterization of a cysteine-rich 16.6-kDa prolamin in rice seeds.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nutrient reservoir activity( GO:0045735 )
endoplasmic reticulum( GO:0005783 )
protein body( GO:0042735 )
Trait Ontology seed maturation( TO:0002661 )
Plant Ontology endosperm( PO:0009089 )
Related Strains
-
Phenotype images
-
Last updated
Oct 6, 2023

/rice/oryzabase