Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | 6PGDH1 |
| Gene Symbol Synonym | Os6PGDH1, Os6PGDH, 6PGDH |
| CGSNL Gene Name | 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 |
| Gene Name Synonym | 6-phosphogluconate dehydrogenase 1, cytosolic 6PGDH, Cytoplasmic 6-phosphogluconate dehydrogenase 1 |
| Protein Name | 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 |
| Allele | Osg6pgh1-1, Osg6pgh1-2 |
| Chromosome No. | 6 |
| Explanation | AF486280. Q9LI00. GO:0071588: hydrogen peroxide mediated signaling pathway. TO:0001069: cooking quality trait. GO:1901000: regulation of response to salt stress. GO:2000904: regulation of starch metabolic process. |
| Trait Class |
Seed - Physiological traits - Storage substances
Tolerance and resistance - Insect resistance Biochemical character Tolerance and resistance - Stress tolerance Seed - Physiological traits - Taste Character as QTL - Grain quality |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK065920
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| MSU ID |
LOC_Os06g02144.1
LOC_Os06g02144.2 |
| RAP ID |
Os06g0111500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Peng B., Liu Y., Qiu J., Peng J., Sun X., Tian X., Zhang Z., Huang Y., Pang R., Zhou W., Zhao J., Sun Y., Wang Q.
Front Plant Sci 2024 15 1436998 <i>OsG6PGH1</i> affects various grain quality traits and participates in the salt stress response of rice.
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Chen L., Kuai P., Ye M., Zhou S., Lu J., Lou Y.
Plants (Basel) 2020 9(11) Overexpression of a Cytosolic 6-Phosphogluconate Dehydrogenase Gene Enhances the Resistance of Rice to <i>Nilaparvata lugens</i>.
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Kong L., Duan Y., Ye Y., Cai Z., Wang F., Qu X., Qiu R., Wu C., Wu W.
PLoS ONE 2019 14(8) e0221473 Screening and analysis of proteins interacting with OsMADS16 in rice (Oryza sativa L.).
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Hou,F.-Y., Huang,J., Yu,S.-L. and Zhang,H.-S.
J. Integr. Plant Biol. 2007 49(5) 655-663 The 6-phosphogluconate Dehydrogenase Genes Are Responsive to Abiotic Stresses in Rice
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Huang,J., Zhang,H., Wang,J. and Yang,J.
Mol. Biol. Rep. 2003 30(4) 223-227 Molecular cloning and characterization of rice 6-phosphogluconate dehydrogenase gene that is up-regulated by salt stress.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
phosphogluconate dehydrogenase (decarboxylating) activity( GO:0004616 )
cytoplasm( GO:0005737 ) pentose-phosphate shunt( GO:0006098 ) response to cold( GO:0009409 ) response to water deprivation( GO:0009414 ) nucleus( GO:0005634 ) cytosol( GO:0005829 ) response to herbivore( GO:0080027 ) response to salicylic acid stimulus( GO:0009751 ) response to jasmonic acid stimulus( GO:0009753 ) response to wounding( GO:0009611 ) ethylene mediated signaling pathway( GO:0009873 ) jasmonic acid mediated signaling pathway( GO:0009867 ) defense response to insect( GO:0002213 ) NADP or NADPH binding( GO:0050661 ) D-gluconate metabolic process( GO:0019521 ) response to abscisic acid stimulus( GO:0009737 ) response to salt stress( GO:0009651 ) regulation of protein metabolic process( GO:0051246 ) |
| Trait Ontology |
salt tolerance( TO:0006001 )
brown planthopper resistance( TO:0000424 ) jasmonic acid sensitivity( TO:0000172 ) plant height( TO:0000207 ) root length( TO:0000227 ) jasmonic acid content( TO:0002668 ) hydrogen peroxide content( TO:0000605 ) seed quality( TO:0000162 ) amylose content( TO:0000196 ) chalky endosperm( TO:0000266 ) gelatinization temperature( TO:0000462 ) spikelet number( TO:0000456 ) seed set percent( TO:0000455 ) endosperm storage protein content( TO:0002653 ) starch content( TO:0000696 ) |
| Plant Ontology |
leaf sheath( PO:0020104 )
leaf( PO:0025034 ) root( PO:0009005 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Nov 18, 2024 | |
